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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19977 (STM1043) | -1.06 | 0.69 | 1.19 | -0.86 | 0.25 | -0.33 | 0.82 | 0.83 | -0.7 | -0.29 | -0.6 | -2.87 | 0.81 | -0.42 | 0.76 | 0.02 | -0.28 | 0.41 | 0.31 | 0.86 | 0.52 | 1.0 | -0.32 | -4.91 | 0.12 | -0.95 | -0.22 | -0.35 | -1.36 | -0.99 | -0.31 | 0.11 | -1.49 | -0.55 | 0.59 | -0.51 | -4.26 | 0.41 | 0.01 |
AAL23481 (traY) | 1.79 | 0.79 | 0.11 | -0.37 | -1.89 | -0.9 | 0.42 | 1.47 | -4.22 | -1.36 | -3.5 | -3.59 | -1.17 | 0.61 | 0.82 | 0.24 | 0.35 | 2.2 | 1.69 | 2.2 | -2.2 | -1.45 | -0.6 | -3.16 | -1.08 | -2.87 | - | -0.37 | -0.36 | -3.35 | -0.54 | -0.64 | -0.46 | -0.33 | -1.12 | - | -2.89 | -0.96 | -1.91 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.