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Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL19578 (dcuC) | 6.94 | 35.63 | 7.92 | 27.55 | 12.61 | 1.95 | 4.27 | 18.31 | 25.77 | 17.68 | 31.56 | 140.52 | 13.17 | 10.1 | 44.38 | 7.57 | 4.77 | 5.13 | 5.34 | 7.25 | 5.41 | 8.27 | 14.0 | 36.08 | 6.43 | 9.55 | 38.34 | 18.55 | 73.44 | 1.11 | 6.48 | 15.41 | 86.5 | 8.99 | 2.78 | 17.25 | 56.41 | 6.92 | 31.09 |
AAL19739 (moaA) | 56.68 | 86.64 | 27.59 | 35.4 | 151.58 | 9.32 | 59.13 | 103.4 | 61.25 | 136.5 | 72.76 | 255.34 | 103.18 | 109.62 | 144.29 | 31.18 | 23.77 | 58.35 | 50.48 | 86.31 | 4.01 | 40.02 | 43.7 | 114.73 | 26.16 | 58.18 | 75.63 | 144.1 | 20.18 | 7.32 | 41.93 | 269.78 | 18.06 | 39.65 | 27.37 | 124.11 | 100.62 | 52.8 | 295.43 |
AAL19740 (moaB) | 48.87 | 170.8 | 78.63 | 133.0 | 159.27 | 42.01 | 162.43 | 133.08 | 110.79 | 291.26 | 71.39 | 372.25 | 86.95 | 160.09 | 414.08 | 50.36 | 99.05 | 143.85 | 108.86 | 161.07 | 25.04 | 96.16 | 29.94 | 213.46 | 55.43 | 118.46 | 129.06 | 232.88 | 97.34 | 8.75 | 55.14 | 119.85 | 55.78 | 17.33 | 113.7 | 238.22 | 171.48 | 114.96 | 230.55 |
AAL19741 (moaC) | 28.73 | 100.23 | 59.39 | 43.98 | 126.62 | 25.45 | 34.03 | 108.04 | 74.28 | 232.24 | 46.08 | 357.43 | 65.15 | 199.27 | 61.2 | 41.36 | 24.62 | 33.7 | 30.34 | 38.08 | 11.19 | 49.6 | 34.75 | 142.96 | 35.81 | 103.96 | 88.59 | 197.57 | 66.72 | 7.07 | 36.47 | 94.75 | 38.54 | 19.84 | 38.05 | 138.04 | 128.0 | 90.16 | 132.28 |
AAL19742 (moaD) | 59.36 | 186.74 | 119.17 | 82.04 | 346.22 | 32.86 | 38.44 | 184.83 | 93.32 | 329.19 | 61.22 | 926.57 | 141.05 | 413.39 | 93.05 | 64.72 | 17.89 | 31.85 | 40.53 | 47.75 | 40.45 | 71.88 | 32.51 | 175.77 | 80.95 | 151.87 | 161.91 | 298.32 | 141.08 | 15.65 | 86.66 | 211.98 | 59.64 | 20.43 | 26.02 | 224.68 | 113.84 | 248.2 | 299.09 |
AAL19743 (moaE) | 29.19 | 104.26 | 31.07 | 33.57 | 80.48 | 16.88 | 19.14 | 67.95 | 38.07 | 115.44 | 27.4 | 366.86 | 38.73 | 150.96 | 41.05 | 12.77 | 15.44 | 20.44 | 19.68 | 23.41 | 18.75 | 51.6 | 9.85 | 96.35 | 29.91 | 69.78 | 79.49 | 91.0 | 44.66 | 6.93 | 26.02 | 48.99 | 24.65 | 5.18 | 22.23 | 104.93 | 77.16 | 44.67 | 68.28 |
AAL20157 (STM1228) | 14.84 | 31.03 | 13.76 | 13.56 | 9.95 | 2.36 | 18.9 | 37.11 | 25.24 | 12.13 | 42.2 | 18.77 | 16.35 | 14.99 | 122.72 | 28.28 | 11.01 | 29.44 | 26.52 | 36.94 | 4.59 | 17.74 | 54.92 | 58.66 | 5.17 | 8.05 | 30.15 | 24.12 | 17.02 | 6.18 | 16.93 | 11.75 | 17.1 | 45.39 | 19.53 | 40.73 | 63.17 | 9.76 | 24.25 |
AAL20181 (STM1255) | 30.01 | 189.68 | 25.05 | 167.05 | 71.46 | 14.31 | 28.55 | 96.1 | 58.15 | 83.06 | 83.46 | 1151.15 | 33.74 | 14.25 | 423.35 | 5.73 | 53.26 | 22.25 | 18.83 | 26.34 | 3.95 | 33.38 | 123.91 | 102.41 | 5.14 | 12.73 | 54.44 | 60.51 | 244.96 | 4.81 | 11.48 | 65.0 | 248.55 | 7.49 | 49.29 | 192.2 | 95.48 | 49.82 | 81.07 |
AAL20182 (STM1256) | 13.91 | 70.2 | 9.36 | 58.63 | 34.31 | 4.08 | 13.89 | 38.24 | 21.83 | 24.72 | 32.85 | 473.88 | 15.27 | 8.85 | 95.13 | 4.33 | 11.77 | 10.82 | 10.04 | 14.48 | 2.82 | 14.97 | 76.96 | 73.24 | 5.32 | 6.71 | 20.47 | 34.92 | 118.87 | 0.55 | 4.13 | 26.83 | 109.66 | 6.31 | 17.29 | 43.42 | 70.08 | 20.83 | 39.23 |
AAL20183 (STM1257) | 9.85 | 37.15 | 4.44 | 21.63 | 15.44 | 2.44 | 6.41 | 21.12 | 11.76 | 10.28 | 17.46 | 252.19 | 8.87 | 8.3 | 28.43 | 4.63 | 3.86 | 8.17 | 8.86 | 9.86 | 1.42 | 4.35 | 25.0 | 35.9 | 3.35 | 4.62 | 15.81 | 16.03 | 55.69 | 0.54 | 2.7 | 11.5 | 47.38 | 5.42 | 10.14 | 17.74 | 42.42 | 8.58 | 18.1 |
AAL20184 (STM1258) | 9.66 | 51.88 | 16.55 | 50.37 | 32.46 | 5.17 | 16.61 | 36.3 | 13.12 | 20.17 | 13.06 | 348.07 | 23.83 | 13.25 | 108.24 | 10.99 | 13.48 | 16.34 | 15.6 | 18.75 | 7.38 | 10.73 | 42.82 | 51.88 | 5.55 | 7.17 | 26.49 | 23.58 | 102.39 | 0.39 | 4.66 | 25.71 | 82.86 | 8.78 | 21.87 | 46.35 | 62.22 | 23.5 | 37.94 |
AAL20185 (STM1259) | 6.83 | 59.73 | 15.83 | 39.18 | 20.87 | 6.51 | 10.81 | 28.64 | 14.88 | 15.71 | 16.51 | 403.01 | 20.92 | 13.37 | 39.95 | 6.09 | 4.6 | 9.38 | 7.56 | 9.93 | 12.34 | 13.09 | 15.31 | 39.89 | 9.67 | 10.98 | 37.26 | 18.68 | 115.05 | 1.21 | 4.84 | 16.49 | 93.97 | 3.85 | 7.33 | 58.38 | 35.9 | 12.88 | 22.47 |
AAL20800 (eda) | 68.26 | 283.81 | 134.18 | 151.98 | 102.82 | 196.79 | 59.05 | 140.44 | 112.07 | 169.69 | 105.94 | 1459.76 | 110.11 | 209.42 | 122.86 | 32.09 | 46.36 | 58.35 | 51.1 | 65.72 | 70.47 | 123.03 | 30.02 | 177.56 | 77.65 | 167.58 | 189.44 | 105.15 | 215.94 | 13.6 | 82.48 | 112.1 | 218.33 | 19.68 | 28.57 | 240.22 | 159.15 | 110.5 | 155.32 |
AAL20801 (edd) | 23.53 | 130.36 | 28.18 | 39.82 | 30.06 | 19.63 | 18.8 | 70.02 | 28.99 | 20.54 | 32.67 | 622.95 | 36.22 | 70.57 | 96.77 | 6.52 | 22.53 | 20.67 | 11.89 | 20.69 | 8.74 | 15.83 | 12.28 | 105.59 | 12.18 | 19.18 | 55.34 | 26.51 | 76.76 | 2.79 | 19.89 | 36.54 | 73.55 | 4.05 | 18.7 | 118.08 | 88.99 | 36.56 | 55.24 |
AAL21108 (fruA) | 28.75 | 131.27 | 40.19 | 47.73 | 64.64 | 34.1 | 21.46 | 48.95 | 29.61 | 7.6 | 55.82 | 1026.68 | 38.9 | 63.52 | 15.77 | 12.65 | 7.64 | 17.76 | 20.85 | 22.03 | 32.11 | 15.79 | 0.97 | 247.94 | 36.26 | 26.56 | 244.48 | 12.17 | 140.71 | 0.79 | 5.37 | 111.01 | 136.94 | 3.43 | 6.46 | 288.2 | 198.56 | 22.43 | 90.82 |
AAL21109 (fruK) | 21.27 | 111.92 | 34.04 | 39.68 | 143.7 | 9.84 | 12.59 | 45.92 | 22.23 | 5.3 | 40.06 | 788.11 | 102.25 | 46.05 | 5.16 | 17.95 | 1.56 | 6.42 | 8.49 | 8.02 | 29.88 | 15.03 | 1.7 | 203.38 | 43.02 | 21.24 | 211.56 | 9.97 | 128.89 | 0.81 | 5.99 | 204.44 | 143.39 | 2.82 | 2.46 | 201.47 | 147.05 | 26.15 | 121.42 |
AAL21110 (fruF) | 29.61 | 126.2 | 232.5 | 47.07 | 315.19 | 7.95 | 30.67 | 78.88 | 24.12 | 5.0 | 34.67 | 701.99 | 529.47 | 76.41 | 9.39 | 22.44 | 2.93 | 9.26 | 15.01 | 14.0 | 39.13 | 11.16 | 1.21 | 232.47 | 63.2 | 22.97 | 209.76 | 13.95 | 148.45 | 0.46 | 4.49 | 463.53 | 165.04 | 1.07 | 6.26 | 212.94 | 169.66 | 206.3 | 223.29 |
AAL21149 (ccmH) | 5.93 | 72.6 | 28.44 | 28.35 | 14.16 | 19.44 | 5.64 | 37.83 | 25.36 | 43.34 | 20.53 | 358.7 | 48.46 | 14.68 | 242.94 | 1.74 | 21.14 | 32.21 | 25.48 | 38.31 | 10.95 | 23.36 | 3.27 | 10.6 | 7.8 | 12.54 | 4.7 | 23.43 | 18.54 | 1.51 | 4.02 | 16.47 | 27.21 | 0.58 | 13.31 | 1.41 | 13.81 | 30.45 | 13.54 |
AAL21150 (ccmG) | 4.74 | 58.7 | 16.09 | 13.97 | 9.74 | 7.22 | 2.86 | 15.93 | 20.59 | 31.91 | 12.4 | 203.57 | 34.55 | 10.46 | 101.18 | 3.15 | 4.47 | 32.39 | 25.47 | 37.67 | 3.84 | 11.67 | 6.4 | 22.18 | 3.57 | 5.36 | 22.88 | 25.68 | 9.26 | 0.23 | 10.15 | 10.94 | 12.11 | 1.24 | 3.55 | 6.39 | 52.57 | 27.6 | 8.63 |
AAL21151 (ccmF) | 4.52 | 55.7 | 13.3 | 15.14 | 7.73 | 7.97 | 1.23 | 12.65 | 16.9 | 30.89 | 11.83 | 273.65 | 24.64 | 12.34 | 52.72 | 1.28 | 4.01 | 21.36 | 20.25 | 23.56 | 3.62 | 14.87 | 4.28 | 13.48 | 3.89 | 7.92 | 26.83 | 17.74 | 15.84 | 0.65 | 3.39 | 8.31 | 20.5 | 0.86 | 2.41 | 6.8 | 19.71 | 16.94 | 6.94 |
AAL21152 (ccmE) | 5.39 | 69.59 | 28.7 | 24.4 | 14.44 | 13.16 | 1.15 | 17.55 | 37.71 | 59.49 | 28.43 | 340.9 | 59.57 | 17.28 | 79.79 | 2.08 | 5.18 | 29.71 | 33.83 | 32.98 | 4.51 | 18.37 | 5.09 | 18.05 | 4.98 | 13.4 | 41.31 | 48.42 | 26.41 | 0.9 | 9.34 | 16.39 | 28.75 | 1.31 | 3.0 | 11.73 | 18.83 | 32.81 | 16.97 |
AAL21153 (ccmD) | 33.06 | 191.06 | 111.1 | 68.69 | 57.75 | 70.94 | 2.4 | 32.46 | 39.2 | 208.02 | 43.05 | 1426.3 | 230.07 | 33.62 | 37.95 | 2.97 | 4.83 | 21.1 | 30.34 | 27.81 | 25.23 | 20.16 | 16.8 | 45.19 | 29.68 | 40.43 | 117.4 | 6.88 | 88.34 | 2.26 | 0.0 | 58.22 | 75.13 | 2.74 | 1.32 | 35.14 | 32.14 | 39.9 | 69.92 |
AAL21154 (ccmC) | 6.6 | 93.53 | 24.69 | 28.37 | 13.62 | 11.27 | 3.06 | 16.01 | 28.18 | 56.61 | 22.62 | 320.01 | 43.95 | 12.51 | 164.99 | 1.53 | 5.99 | 55.16 | 35.23 | 48.82 | 5.64 | 31.91 | 5.39 | 23.77 | 5.1 | 9.75 | 34.52 | 31.07 | 20.98 | 1.56 | 8.06 | 14.43 | 20.74 | 1.18 | 3.93 | 12.86 | 26.91 | 29.65 | 16.83 |
AAL21155 (ccmB) | 5.71 | 55.26 | 15.01 | 25.0 | 10.09 | 6.58 | 1.75 | 10.61 | 22.45 | 42.09 | 20.05 | 355.61 | 31.03 | 10.85 | 96.08 | 0.8 | 5.66 | 46.42 | 36.36 | 44.86 | 6.15 | 8.0 | 2.88 | 24.93 | 5.81 | 9.0 | 38.84 | 11.97 | 27.94 | 1.77 | 0.89 | 11.71 | 23.06 | 0.39 | 4.65 | 15.49 | 19.37 | 11.37 | 14.81 |
AAL21156 (ccmA) | 11.9 | 148.79 | 58.79 | 84.75 | 30.75 | 13.99 | 6.34 | 53.0 | 28.77 | 133.55 | 21.18 | 1021.65 | 102.24 | 13.87 | 300.96 | 0.67 | 14.1 | 157.95 | 139.61 | 151.67 | 25.17 | 12.14 | 1.02 | 52.65 | 17.55 | 29.94 | 125.17 | 37.79 | 97.75 | 2.79 | 3.56 | 43.36 | 80.92 | 1.38 | 7.62 | 62.93 | 48.08 | 37.19 | 50.07 |
AAL21157 (napC) | 7.55 | 167.34 | 48.67 | 174.46 | 59.6 | 12.44 | 14.0 | 41.37 | 121.83 | 152.81 | 58.29 | 676.42 | 168.17 | 22.84 | 1455.2 | 49.82 | 12.42 | 18.59 | 17.79 | 26.11 | 9.54 | 45.79 | 168.02 | 88.81 | 8.32 | 12.99 | 78.04 | 163.24 | 86.24 | 1.43 | 22.63 | 80.38 | 55.95 | 19.05 | 10.97 | 52.3 | 68.83 | 169.58 | 123.24 |
AAL21158 (napB) | 9.7 | 252.79 | 71.32 | 216.21 | 117.04 | 18.98 | 13.18 | 40.38 | 157.94 | 182.78 | 100.03 | 1318.63 | 240.29 | 24.9 | 1240.93 | 58.75 | 14.53 | 14.76 | 16.02 | 20.17 | 29.96 | 66.11 | 66.79 | 94.63 | 15.43 | 31.39 | 117.38 | 220.8 | 118.81 | 2.7 | 20.55 | 135.01 | 75.61 | 11.9 | 9.54 | 99.22 | 40.96 | 232.2 | 234.88 |
AAL21159 (napH) | 8.13 | 159.18 | 26.09 | 147.57 | 76.6 | 9.45 | 15.09 | 30.08 | 68.27 | 76.75 | 44.48 | 593.68 | 97.15 | 10.87 | 1332.57 | 18.78 | 18.13 | 12.53 | 9.96 | 15.22 | 16.45 | 77.44 | 58.1 | 77.59 | 8.72 | 12.53 | 50.32 | 95.74 | 91.05 | 2.2 | 9.57 | 81.29 | 40.19 | 8.17 | 17.44 | 54.11 | 58.25 | 103.17 | 151.86 |
AAL21160 (napG) | 5.21 | 168.07 | 44.81 | 108.1 | 181.55 | 12.02 | 4.97 | 32.85 | 99.43 | 114.28 | 63.45 | 1016.35 | 159.81 | 6.15 | 309.68 | 16.27 | 9.99 | 7.08 | 8.44 | 9.76 | 1.52 | 28.56 | 29.34 | 66.98 | 3.56 | 21.34 | 56.71 | 131.27 | 147.14 | 0.87 | 8.77 | 176.1 | 62.48 | 4.07 | 5.23 | 69.36 | 26.32 | 192.97 | 241.79 |
AAL21161 (napA) | 9.57 | 289.15 | 94.79 | 316.12 | 440.88 | 34.52 | 12.53 | 73.84 | 233.17 | 218.26 | 151.68 | 1211.1 | 230.11 | 9.49 | 1239.6 | 42.86 | 24.63 | 17.92 | 18.24 | 23.76 | 2.35 | 68.99 | 69.25 | 133.58 | 6.0 | 26.64 | 89.03 | 194.46 | 181.09 | 1.6 | 15.31 | 324.88 | 59.55 | 12.08 | 11.56 | 140.94 | 67.84 | 422.61 | 387.55 |
AAL21162 (napD) | 12.03 | 331.47 | 272.87 | 341.97 | 687.11 | 20.21 | 19.51 | 136.88 | 321.96 | 159.24 | 261.08 | 734.62 | 221.85 | 5.84 | 2994.89 | 41.87 | 124.15 | 18.29 | 18.31 | 23.9 | 0.58 | 115.83 | 49.16 | 154.66 | 7.3 | 17.1 | 73.84 | 144.3 | 138.04 | 0.98 | 8.39 | 495.86 | 41.68 | 8.32 | 32.54 | 141.33 | 101.68 | 767.66 | 534.06 |
AAL21163 (napF) | 9.66 | 242.13 | 247.37 | 163.21 | 519.66 | 30.61 | 11.14 | 92.9 | 247.15 | 205.92 | 194.46 | 835.21 | 186.49 | 2.06 | 586.92 | 77.68 | 47.96 | 9.66 | 9.81 | 13.67 | 1.55 | 69.98 | 63.26 | 162.38 | 17.54 | 23.27 | 61.2 | 117.61 | 163.58 | 1.81 | 10.02 | 375.87 | 46.53 | 12.36 | 8.59 | 161.62 | 89.46 | 611.3 | 379.73 |
AAL21373 (aegA) | 6.38 | 25.74 | 13.66 | 17.37 | 17.84 | 1.91 | 3.52 | 16.66 | 20.95 | 22.07 | 27.51 | 37.66 | 15.42 | 8.68 | 60.88 | 3.87 | 2.74 | 17.63 | 16.36 | 21.34 | 3.22 | 3.77 | 4.95 | 34.07 | 4.75 | 3.33 | 22.52 | 26.57 | 30.2 | 0.35 | 14.49 | 8.54 | 32.2 | 3.67 | 3.43 | 22.7 | 43.71 | 9.62 | 14.14 |
AAL21421 (STM2527) | 8.9 | 35.16 | 17.5 | 13.13 | 8.61 | 3.09 | 3.06 | 15.33 | 18.44 | 11.99 | 25.67 | 45.76 | 11.0 | 22.18 | 23.28 | 1.75 | 4.63 | 7.39 | 6.88 | 9.53 | 6.88 | 20.26 | 0.62 | 15.64 | 6.41 | 9.55 | 16.98 | 27.54 | 20.82 | 1.3 | 9.95 | 8.7 | 31.25 | 2.48 | 4.66 | 6.93 | 21.59 | 8.06 | 13.95 |
AAL21422 (STM2528) | 3.76 | 25.77 | 3.43 | 17.29 | 9.9 | 2.15 | 0.86 | 9.18 | 9.91 | 10.41 | 9.04 | 62.47 | 5.32 | 9.25 | 17.87 | 1.55 | 1.47 | 5.19 | 3.87 | 6.72 | 3.34 | 4.88 | 0.41 | 23.67 | 3.81 | 3.54 | 22.83 | 24.27 | 36.21 | 0.54 | 11.44 | 6.92 | 51.16 | 2.69 | 1.87 | 10.51 | 26.83 | 5.56 | 12.1 |
AAL21423 (STM2529) | 5.75 | 30.56 | 9.37 | 18.15 | 18.27 | 3.78 | 2.3 | 12.37 | 18.49 | 19.16 | 18.29 | 63.18 | 10.06 | 8.31 | 21.99 | 3.37 | 2.54 | 5.02 | 6.3 | 6.98 | 3.24 | 6.17 | 1.26 | 25.66 | 3.78 | 4.31 | 20.14 | 37.34 | 28.64 | 0.42 | 15.72 | 18.41 | 41.25 | 6.53 | 3.25 | 13.96 | 43.98 | 12.69 | 29.26 |
AAL21424 (STM2530) | 6.67 | 33.23 | 9.53 | 28.15 | 24.05 | 3.19 | 1.9 | 20.95 | 30.83 | 21.46 | 30.85 | 61.77 | 11.23 | 5.5 | 94.23 | 4.73 | 2.34 | 11.05 | 10.85 | 15.56 | 1.95 | 4.25 | 4.04 | 25.53 | 3.13 | 4.04 | 23.35 | 43.16 | 36.82 | 0.41 | 17.12 | 21.59 | 47.11 | 9.96 | 2.53 | 19.88 | 37.98 | 15.12 | 30.19 |
AAL21946 (STM3071) | 5.4 | 50.01 | 15.76 | 16.34 | 16.35 | 5.11 | 4.21 | 20.73 | 22.02 | 41.2 | 27.37 | 114.05 | 81.24 | 3.35 | 69.58 | 7.75 | 3.08 | 5.85 | 3.25 | 7.3 | 5.49 | 8.54 | 19.52 | 35.67 | 10.68 | 5.92 | 108.74 | 17.91 | 38.31 | 1.09 | 10.36 | 28.91 | 57.23 | 5.6 | 3.43 | 132.61 | 58.46 | 18.65 | 35.19 |
AAL21947 (STM3072) | 2.44 | 36.64 | 11.17 | 8.94 | 10.79 | 2.66 | 2.82 | 11.03 | 10.92 | 18.91 | 10.38 | 61.44 | 32.53 | 5.46 | 16.04 | 4.52 | 1.3 | 3.02 | 1.83 | 3.67 | 2.69 | 4.01 | 8.79 | 27.66 | 5.72 | 2.8 | 78.69 | 11.28 | 26.5 | 0.41 | 5.59 | 12.89 | 37.19 | 4.33 | 1.31 | 62.12 | 53.32 | 12.32 | 25.68 |
AAL21948 (STM3073) | 3.85 | 32.7 | 5.9 | 11.25 | 9.55 | 3.65 | 2.34 | 11.68 | 9.35 | 15.33 | 12.86 | 77.94 | 18.92 | 5.01 | 31.62 | 3.76 | 1.78 | 6.12 | 6.1 | 8.02 | 3.71 | 2.83 | 6.25 | 33.27 | 4.91 | 3.41 | 74.97 | 13.01 | 27.23 | 0.29 | 7.04 | 11.44 | 34.12 | 4.82 | 3.85 | 29.2 | 48.69 | 7.71 | 30.9 |
AAL21949 (STM3074) | 11.22 | 37.74 | 24.18 | 14.53 | 14.25 | 4.99 | 7.09 | 34.29 | 15.07 | 19.36 | 19.75 | 66.62 | 34.57 | 26.04 | 56.91 | 10.26 | 15.9 | 11.44 | 12.13 | 14.93 | 10.57 | 24.64 | 13.23 | 29.66 | 12.81 | 7.95 | 58.3 | 18.73 | 28.18 | 0.72 | 7.8 | 16.92 | 30.68 | 8.49 | 12.43 | 26.94 | 54.82 | 15.06 | 40.56 |
AAL21950 (STM3075) | 10.75 | 28.37 | 12.76 | 8.58 | 8.86 | 4.02 | 4.14 | 17.74 | 11.2 | 8.74 | 16.43 | 53.42 | 17.02 | 18.19 | 26.89 | 3.99 | 3.2 | 6.25 | 7.42 | 8.53 | 10.4 | 6.43 | 5.41 | 22.4 | 8.54 | 6.79 | 72.96 | 8.99 | 19.04 | 1.41 | 3.66 | 9.74 | 21.21 | 3.72 | 4.6 | 24.78 | 39.86 | 8.88 | 21.26 |
AAL22336 (nirB) | 42.46 | 340.27 | 94.7 | 291.51 | 313.71 | 24.89 | 20.23 | 75.55 | 106.94 | 37.45 | 102.53 | 1249.45 | 65.82 | 9.65 | 453.77 | 40.24 | 4.48 | 3.99 | 3.39 | 5.02 | 4.34 | 14.62 | 53.96 | 408.63 | 26.51 | 12.18 | 263.33 | 47.6 | 619.82 | 3.06 | 4.72 | 812.02 | 161.42 | 2.59 | 9.25 | 602.61 | 86.96 | 146.26 | 499.04 |
AAL22337 (nirD) | 44.43 | 417.39 | 49.68 | 397.86 | 338.42 | 17.48 | 32.86 | 62.55 | 111.45 | 49.03 | 92.32 | 1703.84 | 44.02 | 9.47 | 458.87 | 50.15 | 16.71 | 10.97 | 9.57 | 13.32 | 6.2 | 11.91 | 41.72 | 540.34 | 38.36 | 13.57 | 482.33 | 97.87 | 1119.28 | 2.61 | 9.78 | 988.29 | 313.28 | 5.64 | 25.13 | 1017.32 | 124.54 | 59.6 | 744.28 |
AAL22338 (nirC) | 9.61 | 61.25 | 3.21 | 106.81 | 39.97 | 2.1 | 7.73 | 14.98 | 18.49 | 3.9 | 21.11 | 799.49 | 5.45 | 7.47 | 129.47 | 12.45 | 2.5 | 2.94 | 2.58 | 3.93 | 1.24 | 2.18 | 35.97 | 209.68 | 5.5 | 5.39 | 107.31 | 34.56 | 342.67 | 0.56 | 1.98 | 203.75 | 116.01 | 1.98 | 5.58 | 110.75 | 95.88 | 7.13 | 248.51 |
AAL22339 (cysG) | 38.61 | 85.59 | 37.21 | 79.44 | 49.0 | 14.63 | 7.44 | 53.98 | 82.78 | 59.47 | 80.28 | 536.58 | 59.74 | 80.62 | 59.17 | 11.23 | 12.22 | 12.25 | 13.49 | 15.71 | 13.25 | 40.77 | 18.27 | 141.63 | 22.96 | 45.72 | 130.0 | 67.34 | 294.4 | 5.81 | 18.63 | 103.22 | 138.68 | 7.04 | 8.62 | 113.65 | 63.5 | 33.67 | 189.59 |
AAL22374 (gntT) | 13.14 | 237.28 | 9.47 | 16.69 | 8.33 | 9.24 | 5.93 | 54.37 | 36.79 | 7.83 | 44.55 | 1228.22 | 17.22 | 58.9 | 75.08 | 7.52 | 13.98 | 9.26 | 6.9 | 9.71 | 8.79 | 7.68 | 3.94 | 52.83 | 5.63 | 11.48 | 13.75 | 10.54 | 20.61 | 2.68 | 4.35 | 15.18 | 9.46 | 3.76 | 44.57 | 68.83 | 47.37 | 10.89 | 15.14 |
AAL22401 (gntU) | 15.42 | 84.25 | 5.56 | 7.99 | 5.22 | 2.06 | 5.29 | 21.5 | 11.83 | 6.8 | 16.9 | 660.9 | 9.96 | 30.99 | 18.53 | 2.17 | 9.73 | 6.77 | 5.66 | 7.25 | 5.23 | 6.99 | 1.6 | 24.16 | 4.3 | 6.34 | 11.58 | 7.81 | 13.05 | 2.19 | 5.09 | 7.74 | 12.17 | 1.79 | 11.78 | 19.03 | 37.37 | 5.7 | 11.66 |
AAL22402 (gntK) | 13.76 | 74.82 | 12.57 | 6.42 | 3.59 | 2.1 | 3.95 | 18.18 | 5.72 | 7.58 | 7.49 | 462.48 | 17.35 | 19.65 | 13.68 | 9.7 | 3.15 | 5.03 | 4.98 | 4.87 | 5.75 | 4.46 | 5.79 | 35.91 | 6.11 | 4.62 | 8.36 | 9.1 | 9.04 | 1.24 | 4.85 | 8.76 | 8.32 | 4.52 | 7.05 | 18.84 | 74.2 | 7.47 | 17.7 |
AAL22544 (mtlA) | 19.89 | 149.07 | 166.02 | 41.49 | 93.71 | 85.25 | 43.1 | 39.56 | 66.8 | 112.4 | 36.79 | 40.78 | 81.5 | 61.12 | 100.01 | 46.98 | 36.16 | 35.6 | 26.38 | 36.31 | 50.33 | 135.75 | 25.2 | 53.38 | 37.96 | 62.55 | 47.03 | 63.82 | 33.56 | 11.75 | 33.25 | 104.82 | 18.5 | 24.89 | 33.43 | 29.86 | 102.2 | 146.26 | 147.69 |
AAL22545 (mtlD) | 31.05 | 131.01 | 135.71 | 38.29 | 62.77 | 38.43 | 70.32 | 53.11 | 94.67 | 120.31 | 90.93 | 108.62 | 94.27 | 92.98 | 70.96 | 56.21 | 32.97 | 27.63 | 24.16 | 30.23 | 67.91 | 74.15 | 26.49 | 48.0 | 53.37 | 67.86 | 51.26 | 72.36 | 50.72 | 29.15 | 41.02 | 69.76 | 30.46 | 33.65 | 46.51 | 45.37 | 71.4 | 89.17 | 92.35 |
AAL22672 (ccmG) | 4.74 | 58.7 | 16.09 | 13.97 | 9.74 | 7.22 | 2.86 | 15.93 | 20.59 | 31.91 | 12.4 | 203.57 | 34.55 | 10.46 | 101.18 | 3.15 | 4.47 | 32.39 | 25.47 | 37.67 | 3.84 | 11.67 | 6.4 | 22.18 | 3.57 | 5.36 | 22.88 | 25.68 | 9.26 | 0.23 | 10.15 | 10.94 | 12.11 | 1.24 | 3.55 | 6.39 | 52.57 | 27.6 | 8.63 |
AAL22673 (ccmF) | 4.52 | 55.7 | 13.3 | 15.14 | 7.73 | 7.97 | 1.23 | 12.65 | 16.9 | 30.89 | 11.83 | 273.65 | 24.64 | 12.34 | 52.72 | 1.28 | 4.01 | 21.36 | 20.25 | 23.56 | 3.62 | 14.87 | 4.28 | 13.48 | 3.89 | 7.92 | 26.83 | 17.74 | 15.84 | 0.65 | 3.39 | 8.31 | 20.5 | 0.86 | 2.41 | 6.8 | 19.71 | 16.94 | 6.94 |
AAL22674 (ccmE) | 5.39 | 69.59 | 28.7 | 24.4 | 14.44 | 13.16 | 1.15 | 17.55 | 37.71 | 59.49 | 28.43 | 340.9 | 59.57 | 17.28 | 79.79 | 2.08 | 5.18 | 29.71 | 33.83 | 32.98 | 4.51 | 18.37 | 5.09 | 18.05 | 4.98 | 13.4 | 41.31 | 48.42 | 26.41 | 0.9 | 9.34 | 16.39 | 28.75 | 1.31 | 3.0 | 11.73 | 18.83 | 32.81 | 16.97 |
AAL22675 (ccmD) | 33.06 | 191.06 | 111.1 | 68.69 | 57.75 | 70.94 | 2.4 | 32.46 | 39.2 | 208.02 | 43.05 | 1426.3 | 230.07 | 33.62 | 37.95 | 2.97 | 4.83 | 21.1 | 30.34 | 27.81 | 25.23 | 20.16 | 16.8 | 45.19 | 29.68 | 40.43 | 117.4 | 6.88 | 88.34 | 2.26 | 0.0 | 58.22 | 75.13 | 2.74 | 1.32 | 35.14 | 32.14 | 39.9 | 69.92 |
AAL22676 (ccmC) | 6.6 | 93.53 | 24.69 | 28.37 | 13.62 | 11.27 | 3.06 | 16.01 | 28.18 | 56.61 | 22.62 | 320.01 | 43.95 | 12.51 | 164.99 | 1.53 | 5.99 | 55.16 | 35.23 | 48.82 | 5.64 | 31.91 | 5.39 | 23.77 | 5.1 | 9.75 | 34.52 | 31.07 | 20.98 | 1.56 | 8.06 | 14.43 | 20.74 | 1.18 | 3.93 | 12.86 | 26.91 | 29.65 | 16.83 |
AAL22677 (ccmB) | 5.71 | 55.26 | 15.01 | 25.0 | 10.09 | 6.58 | 1.75 | 10.61 | 22.45 | 42.09 | 20.05 | 355.61 | 31.03 | 10.85 | 96.08 | 0.8 | 5.66 | 46.42 | 36.36 | 44.86 | 6.15 | 8.0 | 2.88 | 24.93 | 5.81 | 9.0 | 38.84 | 11.97 | 27.94 | 1.77 | 0.89 | 11.71 | 23.06 | 0.39 | 4.65 | 15.49 | 19.37 | 11.37 | 14.81 |
AAL23106 (nrfG) | 15.28 | 24.2 | 5.2 | 7.99 | 2.78 | 0.86 | 3.21 | 8.21 | 16.9 | 15.73 | 36.26 | 29.24 | 7.3 | 5.9 | 27.03 | 2.42 | 2.47 | 3.14 | 3.6 | 5.06 | 2.69 | 7.31 | 5.83 | 17.58 | 3.1 | 3.02 | 9.27 | 16.32 | 13.61 | 1.45 | 3.87 | 5.27 | 12.07 | 2.16 | 6.81 | 7.08 | 33.47 | 3.49 | 8.81 |
Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)