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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | ATCC_14028 | SL1344 | ATCC_14028,E-stationary,WT | 14028s | ATCC_14028,Log,rpsL*_mut | 14028s,mLPM | opgGH_mut | LT2 | Florfenicol | NCTC_12023,37_C | Chlortetracycline | SL1344,NarS_defic | ATCC_14028,E-stationary,rpsD*_mut | LT2,ridA | fliA_del | High-patho | LT2,Cell_susp_cult | 14028s,hilC_del,pBAD24 | 14028s,sprB_del,pBAD24 | 14028s,pBAD24 | gastro | hfq_mut | Low-patho,42C | plank_cells | ATCC_14028,gastro | Typh_14028s,Expo_phase | biofilm,cpxR_mut | 14028s,typhoid | 14028s,rtcR | Typh_14028s | infection | ATCC_14028,Log,WT | 14028s,rtcB | High-patho,42C | LT2,Cell_susp_cult,Rho_Y80C | plank_cells,cpxR_mut | biofilm | ATCC_14028,E-stationary,rpsL*_mut | ATCC_14028,Log,rpsD*_mut |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AAL22680 (torD) | 1.08 | 0.85 | 0.25 | -2.01 | -2.88 | -3.83 | -1.4 | -0.87 | -0.6 | 0.21 | 0.24 | -2.31 | 0.0 | -1.72 | -1.97 | -0.8 | -1.72 | -1.32 | -1.58 | -0.7 | -3.47 | -0.28 | 2.11 | 1.71 | -1.47 | -2.25 | -1.01 | -1.6 | -1.98 | -3.3 | -2.55 | 0.82 | -2.08 | 0.7 | -2.16 | -1.1 | 3.2 | -0.68 | -0.01 |
AAL22681 (torA) | 1.63 | 1.2 | -0.66 | -1.44 | -2.28 | -3.06 | -1.21 | -0.46 | -0.7 | -0.8 | -0.03 | -1.51 | -0.56 | -1.02 | -0.78 | -0.56 | -1.17 | -0.9 | -1.03 | -0.68 | -2.28 | -0.48 | 1.88 | 2.09 | -1.0 | -1.84 | -1.08 | -1.38 | -1.77 | -3.69 | -1.58 | -1.24 | -1.73 | 1.0 | -0.15 | -1.0 | 2.98 | -1.79 | -0.79 |
AAL22682 (torC) | 1.45 | 0.58 | -1.4 | -2.06 | -2.41 | -3.44 | -2.3 | -0.37 | -1.08 | -1.44 | -0.15 | -2.17 | -0.54 | -0.57 | -1.71 | -0.26 | -2.08 | -1.24 | -1.43 | -1.06 | -2.57 | -2.69 | 2.39 | 2.36 | -0.46 | -2.39 | -1.31 | -1.57 | -2.34 | -3.08 | -1.7 | -1.47 | -2.04 | 1.51 | -1.15 | -1.31 | 3.12 | -1.79 | -0.68 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.