Heatmap: Cluster_39 (HCCA)

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Gene	55488,Cefotaxime	AH1263,WT,TSB	ATCC25923,DMSO	ATCC29213,Biofilm	ATCC6538,1/4MIC BITC	HG001,WT,L-exponential	IPLA1,NaPi	IPLA1,NaPi + LysH5	IPLA1,phage phiIPLA-RODI	MRSA BD02-25,WT	NCTC8325,RSH	NCTC8325,RSH,Mup	NCTC8325,WT	NCTC8325,WT,E-Log	NCTC8325,WT,Mup	Newman,Exponential	Newman,TSB	Newman,TSB + 1 mM MnCl2	Newman,WT	Newman,WT,Angeli's salt,Exponential	Newman,WT,Calprotectin,Exponential	Newman,WT,Exponential	Newman,WT,Na2S,Exponential	NRS384,WT	NRS384-rpoB-H481N-SCV	RN4220,WT,E-Log	RPMI + 10%LB,Exponential	TSB,Exponential	TSB,L-exponential	TSB,Stationary	UAMS1,WT	USA100,WT,CA-MHB	USA100,WT,CA-MHB,0.5ug/mL Naf	USA100,WT,CA-MHB,0ug/mL Naf	USA100,WT,CA-MHB,15ug/mL Naf	USA100,WT,CA-MHB,20ug/mL Naf	USA100,WT,RPMI + 10%LB	USA100,WT,RPMI + 10%LB,0.25ug/mL Naf	USA100,WT,RPMI + 10%LB,0.5ug/mL Naf	USA100,WT,RPMI + 10%LB,0ug/mL Naf	USA300 LAC,CA-MHB	USA300 LAC,CA-MHB,0.38 ug/mL Naf	USA300 LAC,RPMI + 10%LB	USA300 MRSA,dpurR	USA300 MRSA,WT	USA300 P23,Exponential	USA300 P23,Floxuridine,Exponential	USA300 P23,streptozotocin,Exponential	USA300 P23,WT,Exponential	USA300,0.0625ug/mL Naf	USA300,0.063 ug/mL Naf	USA300,0.1ug/mL Naf	USA300,0.5ug/mL Naf	USA300,0ug/mL Naf	USA300,1.0 ug/mLNaf	USA300,1.0ug/mL Naf	USA300,15ug/mL Naf	USA300,CA-MHB	USA300,CA-MHB,0.45ug/mL Van	USA300,CA-MHB,0.65ug/mL Van	USA300,CA-MHB,0.7ug/mL Van	USA300,CA-MHB,0.8ug/mL Van	USA300,CA-MHB,0ug/mL Van	USA300,delta agr::tet,DMSO	USA300,delta-mgrA::tet	USA300,DMSO	USA300,Exponential	USA300,RPMI + 10%LB	USA300,RPMI + 10%LB,0.031 ug/mL Naf	USA300,RPMI + 10%LB,0.063 ug/mL Naf	USA300,RPMI + 10%LB,0.1ug/mL Naf	USA300,RPMI + 10%LB,0.375ug/mL Van	USA300,RPMI + 10%LB,0.45ug/mL Van	USA300,RPMI + 10%LB,0.6ug/mL Van	USA300,RPMI + 10%LB,0.8ug/mL Van	USA300,RPMI + 10%LB,0ug/mL Naf	USA300,RPMI + 10%LB,0ug/mL Van	USA300,RPMI + 10%LB,15ug/mL Naf	USA300,Stationary	USA300,WT	USA300,WT,10 uM Linoleic Acid	USA300,WT,Apicidin	USA300,WT,DMSO	USA300,WT,Log	USA300,WT,RPMI + 10%LB	WT,Exponential	WT,L-exponential	WT,Mid-Log	WT,TSB,Exponential	WT,TSB,L-exponential	WT,TSB,Stationary	XN108,ccpA gene knock out
CPD29601 (ribH)	298.46	57.05	31.91	72.84	88.88	137.22	73.55	71.54	17.94	15.21	44.45	28.38	50.8	289.3	26.82	30.42	15.07	17.94	27.23	37.94	85.97	38.69	83.05	94.0	144.71	518.82	92.96	281.49	231.14	21.89	23.06	156.49	336.58	339.91	300.38	300.94	498.95	180.99	192.0	159.31	72.89	114.12	47.49	61.09	73.57	133.97	83.29	50.73	567.46	667.73	31.83	196.99	239.56	213.12	59.01	41.65	80.73	58.18	172.47	55.16	52.42	53.67	84.75	27.41	78.13	30.4	454.85	126.84	148.91	189.55	181.29	68.91	82.13	131.66	139.28	182.7	96.29	209.05	211.19	115.43	237.64	25.57	29.39	204.23	25.83	45.89	22.42	23.71	127.88	395.79	27.95	46.99
CPD29641 (ribA)	211.84	48.32	17.91	74.48	50.2	88.08	77.62	69.54	18.14	8.1	34.26	24.75	34.5	210.37	28.75	20.93	14.81	16.98	31.73	29.11	133.79	32.27	70.54	49.34	83.65	433.31	76.8	103.1	128.85	12.38	9.58	89.12	207.26	196.81	190.5	191.78	317.21	106.83	111.3	92.43	26.86	48.04	19.99	40.21	42.81	104.69	56.37	25.54	557.69	465.05	16.55	129.89	155.93	139.79	39.67	37.06	51.38	32.76	112.34	29.71	27.91	25.51	51.44	16.28	70.94	82.74	808.68	83.94	92.96	117.36	136.11	50.45	57.99	70.74	68.2	125.2	54.11	149.35	528.72	75.08	162.0	15.8	17.36	130.79	21.06	31.21	39.79	60.75	83.59	244.15	16.92	31.7
CPD29676 (ribB)	233.44	55.6	17.58	92.13	54.09	71.07	84.98	78.19	22.77	10.64	39.41	28.7	38.91	227.84	29.31	18.43	13.26	16.11	32.01	24.27	173.26	34.93	57.67	46.73	83.0	465.83	82.64	92.13	112.54	11.92	8.74	97.88	221.89	215.91	216.16	221.89	359.77	118.85	129.87	99.39	31.33	52.39	20.2	45.36	43.64	126.15	49.54	25.0	709.54	567.88	23.14	145.42	192.61	169.29	40.59	38.88	55.89	31.04	151.85	29.79	31.69	29.32	61.75	19.7	65.31	59.46	712.4	97.59	108.35	134.76	158.39	69.63	74.9	74.86	71.57	155.01	58.22	182.79	571.16	60.97	114.78	19.08	20.56	134.61	19.51	29.65	39.19	53.79	79.17	227.23	13.93	34.23
CPD29715 (ribD)	250.65	82.76	24.69	55.64	63.19	60.02	79.31	75.73	27.43	20.17	46.13	27.16	45.5	295.84	36.84	17.62	18.36	19.21	39.53	25.09	157.33	45.19	55.29	44.18	74.22	492.27	79.46	226.48	90.6	18.77	15.79	104.52	249.63	237.31	234.08	240.09	384.39	151.59	164.41	129.94	26.49	48.26	22.82	66.71	73.85	119.79	46.71	24.73	549.68	645.45	52.1	208.43	229.39	195.73	67.26	60.31	80.38	40.99	212.09	53.46	49.18	42.49	93.73	28.32	74.14	18.08	873.37	129.26	141.92	184.23	230.58	91.13	95.21	111.74	109.32	211.63	90.4	243.17	718.54	65.04	116.2	34.7	28.8	121.48	19.92	47.26	42.8	83.0	97.21	195.31	25.05	53.57

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)