Heatmap: Cluster_31 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
55488,Cefotaxime
AH1263,WT,TSB
ATCC25923,DMSO
ATCC29213,Biofilm
ATCC6538,1/4MIC BITC
HG001,WT,L-exponential
IPLA1,NaPi
IPLA1,NaPi + LysH5
IPLA1,phage phiIPLA-RODI
MRSA BD02-25,WT
NCTC8325,RSH
NCTC8325,RSH,Mup
NCTC8325,WT
NCTC8325,WT,E-Log
NCTC8325,WT,Mup
Newman,Exponential
Newman,TSB
Newman,TSB + 1 mM MnCl2
Newman,WT
Newman,WT,Angeli's salt,Exponential
Newman,WT,Calprotectin,Exponential
Newman,WT,Exponential
Newman,WT,Na2S,Exponential
NRS384,WT
NRS384-rpoB-H481N-SCV
RN4220,WT,E-Log
RPMI + 10%LB,Exponential
TSB,Exponential
TSB,L-exponential
TSB,Stationary
UAMS1,WT
USA100,WT,CA-MHB
USA100,WT,CA-MHB,0.5ug/mL Naf
USA100,WT,CA-MHB,0ug/mL Naf
USA100,WT,CA-MHB,15ug/mL Naf
USA100,WT,CA-MHB,20ug/mL Naf
USA100,WT,RPMI + 10%LB
USA100,WT,RPMI + 10%LB,0.25ug/mL Naf
USA100,WT,RPMI + 10%LB,0.5ug/mL Naf
USA100,WT,RPMI + 10%LB,0ug/mL Naf
USA300 LAC,CA-MHB
USA300 LAC,CA-MHB,0.38 ug/mL Naf
USA300 LAC,RPMI + 10%LB
USA300 MRSA,dpurR
USA300 MRSA,WT
USA300 P23,Exponential
USA300 P23,Floxuridine,Exponential
USA300 P23,streptozotocin,Exponential
USA300 P23,WT,Exponential
USA300,0.0625ug/mL Naf
USA300,0.063 ug/mL Naf
USA300,0.1ug/mL Naf
USA300,0.5ug/mL Naf
USA300,0ug/mL Naf
USA300,1.0 ug/mLNaf
USA300,1.0ug/mL Naf
USA300,15ug/mL Naf
USA300,CA-MHB
USA300,CA-MHB,0.45ug/mL Van
USA300,CA-MHB,0.65ug/mL Van
USA300,CA-MHB,0.7ug/mL Van
USA300,CA-MHB,0.8ug/mL Van
USA300,CA-MHB,0ug/mL Van
USA300,delta agr::tet,DMSO
USA300,delta-mgrA::tet
USA300,DMSO
USA300,Exponential
USA300,RPMI + 10%LB
USA300,RPMI + 10%LB,0.031 ug/mL Naf
USA300,RPMI + 10%LB,0.063 ug/mL Naf
USA300,RPMI + 10%LB,0.1ug/mL Naf
USA300,RPMI + 10%LB,0.375ug/mL Van
USA300,RPMI + 10%LB,0.45ug/mL Van
USA300,RPMI + 10%LB,0.6ug/mL Van
USA300,RPMI + 10%LB,0.8ug/mL Van
USA300,RPMI + 10%LB,0ug/mL Naf
USA300,RPMI + 10%LB,0ug/mL Van
USA300,RPMI + 10%LB,15ug/mL Naf
USA300,Stationary
USA300,WT
USA300,WT,10 uM Linoleic Acid
USA300,WT,Apicidin
USA300,WT,DMSO
USA300,WT,Log
USA300,WT,RPMI + 10%LB
WT,Exponential
WT,L-exponential
WT,Mid-Log
WT,TSB,Exponential
WT,TSB,L-exponential
WT,TSB,Stationary
XN108,ccpA gene knock out
CPC66128 (graS)
0.43 -0.6 0.23 1.77 -1.17 0.38 1.31 1.45 2.43 -0.62 0.4 -1.52 0.02 0.49 -1.81 -2.02 0.66 0.71 0.1 -1.15 -0.72 -0.52 -1.36 -0.62 -0.95 -0.2 -0.4 -1.6 -0.64 -0.04 -1.83 0.78 0.69 0.84 0.59 0.56 -0.13 -0.17 -0.15 -0.02 -0.7 -0.77 -1.42 0.42 -0.89 -0.16 0.59 -0.15 -0.68 0.55 0.37 -1.22 0.12 0.18 0.36 0.24 -0.15 -0.16 0.46 -0.21 -0.21 -0.72 -0.13 0.04 -0.04 0.57 -0.22 -0.56 -1.09 -1.0 -1.43 -0.58 -0.65 -1.26 -0.75 -1.42 -0.97 -1.12 -1.99 -0.77 -1.24 -0.38 0.05 0.22 -0.25 0.74 0.4 1.15 -0.41 -0.36 -0.3 -2.23
CPC66177 (yvcP)
0.66 -0.69 0.12 1.21 -1.62 -0.01 1.18 1.24 1.99 -1.85 0.5 -1.65 0.07 0.41 -1.67 -2.66 0.16 0.37 -0.48 -1.89 -1.03 -0.8 -2.42 -0.55 -0.93 -0.21 -0.47 -1.65 -0.44 0.22 -1.44 0.87 0.81 0.92 0.71 0.71 -0.06 -0.04 0.04 0.07 -0.66 -0.67 -1.4 0.38 -0.78 -0.69 0.49 -0.26 -1.55 0.76 0.59 -1.35 0.2 0.26 0.36 0.2 -0.1 -0.03 0.74 -0.13 -0.29 -0.68 -0.04 -0.07 -0.03 2.94 -0.76 -0.47 -1.01 -0.86 -1.52 -0.47 -0.58 -1.25 -0.8 -1.39 -0.9 -1.16 -2.73 -0.64 -0.89 -0.43 -0.09 0.17 -0.52 0.92 -0.41 -1.79 -0.23 -0.31 -0.07 -1.41

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.