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Heatmap: Cluster_19 (HCAA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

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Gene
5448
5448,10 day biofilm
5448,16 hr biofilm
5448,6 day biofilm
5448,8 hr biofilm
5448,cell culture,C medium broth
5448,cell culture,THY broth
5448,early log planktonic
5448,early stationary planktonic
5448,late log planktonic
M1GAS2221,Early-stationary,35C,Isogenic fabT(-)
M1GAS2221,Early-stationary,35C,WT
M1GAS2221,Early-stationary,40C,Isogenic fabT(-)
M1GAS2221,Early-stationary,40C,WT
M1GAS2221,Mid-exponential,35C,Isogenic fabT(-)
M1GAS2221,Mid-exponential,35C,WT
M1GAS2221,Mid-exponential,40C,Isogenic fabT(-)
M1GAS2221,Mid-exponential,40C,WT
M1T15448,M1T1DPTP
M1T15448,SENhb mutant
M1T15448,TyK(-)
M1T15448,WT
M1T15448,mutant
M23ND,M23ND/covS+
M23ND,M23ND/covS-
MGAS15249
MGAS2221,Exponential
MGAS2221,Parental M1 isolate
MGAS2221,Stationary phase
MGAS2221,rocA mutant
MGAS28426
MGAS28426,Early-stationary,WT
MGAS28426,Mid-exponential,clinical isolate
MGAS29454,Early-stationary,clinical isolate
MGAS29454,Mid-exponential,clinical isolate
MGAS5005,lab
Unspecified Strain
Unspecified Strain,Early-stationary,Clade1
Unspecified Strain,Early-stationary,Clade2
Unspecified Strain,Early-stationary,Clade3
Unspecified Strain,Early-stationary,Subclade1A
Unspecified Strain,Early-stationary,Subclade1B
Unspecified Strain,Early-stationary,Subclade2A
Unspecified Strain,Early-stationary,Subclade2B
Unspecified Strain,Early-stationary,Subclade3D
Unspecified Strain,Exponential,Parental
Unspecified Strain,Exponential,RD2(-)
Unspecified Strain,Late-exponential
Unspecified Strain,Mid-exponential,Clade1
Unspecified Strain,Mid-exponential,Clade2
Unspecified Strain,Mid-exponential,Clade3
Unspecified Strain,Mid-exponential,Subclade3D
Unspecified Strain,RocA(-)
Unspecified Strain,WT,Todd Hewitt broth
0.59 0.08 0.07 0.09 0.11 0.4 0.38 0.32 0.11 0.25 0.23 0.22 0.81 0.42 0.32 0.37 0.36 0.44 0.38 0.43 0.43 0.84 1.0 0.16 0.17 0.1 0.22 0.13 0.16 0.11 0.23 0.05 0.19 0.24 0.25 0.27 0.33 0.08 0.07 0.05 0.12 0.16 0.17 0.13 0.07 0.08 0.16 0.09 0.19 0.66 0.58 0.62 0.07 0.5
0.46 0.09 0.07 0.1 0.06 0.49 0.41 0.39 0.13 0.21 0.32 0.26 1.0 0.49 0.33 0.35 0.41 0.43 0.47 0.67 0.32 0.35 0.81 0.2 0.19 0.15 0.45 0.26 0.47 0.21 0.22 0.1 0.18 0.24 0.21 0.23 0.24 0.08 0.1 0.06 0.17 0.19 0.21 0.17 0.06 0.1 0.23 0.07 0.16 0.55 0.43 0.4 0.08 0.41
0.45 0.12 0.09 0.13 0.09 0.35 0.38 0.38 0.13 0.24 0.3 0.26 0.83 0.48 0.29 0.29 0.33 0.36 0.8 0.87 0.37 0.4 1.0 0.12 0.14 0.11 0.26 0.2 0.42 0.17 0.17 0.09 0.15 0.16 0.21 0.23 0.26 0.09 0.1 0.07 0.18 0.2 0.21 0.2 0.07 0.11 0.2 0.07 0.17 0.43 0.34 0.33 0.07 0.37

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)