"sequence_id","alias","species","description","type"
"AAC73433","prpR","Escherichia coli","propionate catabolism operon regulatory protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Propionate catabolism activator [Interproscan].","protein_coding"
"AAC74285","dhaR","Escherichia coli","dhaKLM operon transcription activator [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAC74385","pspF","Escherichia coli","psp operon transcriptional activator [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAC74405","tyrR","Escherichia coli","aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase [Ensembl]. PAS domain, Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAC75280","atoC","Escherichia coli","fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AAC75544","hyfR","Escherichia coli","hydrogenase-4 transcriptional activator [Ensembl]. GAF domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAC75607","glrR","Escherichia coli","response regulator regulating glmY sRNA in two-component system with sensor protein GlrK [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain [Interproscan].","protein_coding"
"AAC75751","norR","Escherichia coli","anaerobic nitric oxide reductase DNA-binding transcriptional activator [Ensembl]. GAF domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAC75773","fhlA","Escherichia coli","formate hydrogenlyase transcriptional activator [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAC75907","ygeV","Escherichia coli","putative sigma-54-interacting transcriptional activator [Ensembl]. PAS domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAC76447","rtcR","Escherichia coli","sigma 54-dependent transcriptional regulator of rtcBA expression [Ensembl]. Sigma-54 interaction domain, Regulator of RNA terminal phosphate cyclase [Interproscan].","protein_coding"
"AAC76865","glnG","Escherichia coli","fused DNA-binding response regulator in two-component regulatory system with GlnL: response regulator/sigma54 interaction protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AAC76978","zraR","Escherichia coli","fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AAL19321","STM0367","Salmonella enterica","regulator for prp operon (EBP family) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Propionate catabolism activator [Interproscan].","protein_coding"
"AAL19522","STM0571","Salmonella enterica","putative inner membrane protein [Ensembl]. PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAL19603","STM0652","Salmonella enterica","putative sigma-54 dependent transcriptional regulator [Ensembl]. Sigma-54 interaction domain, Propionate catabolism activator [Interproscan].","protein_coding"
"AAL20600","STM1683","Salmonella enterica","transcriptional regulator of aromatic amino acid biosynthesis genes (aroF, aroG, tyrA) and aromatic amino acid transport [Ensembl]. Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAL20608","STM1691","Salmonella enterica","transcription activator [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAL21262","STM2361","Salmonella enterica","putative regulatory protein [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAL21296","STM2396","Salmonella enterica","activator protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AAL21456","STM2562","Salmonella enterica","putative transcriptional regulator of two-component regulator protein [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain [Interproscan].","protein_coding"
"AAL21719","STM2839","Salmonella enterica","putative EBP family regulator [Ensembl]. GAF domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAL21739","STM2859","Salmonella enterica","formate hydrogen-lyase transcriptional activator for fdhF, hyc and hyp operons [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"AAL22383","STM3522","Salmonella enterica","sigma N (sigma 54)-dependent regulator of rtcBA expression [Ensembl]. Sigma-54 interaction domain, Regulator of RNA terminal phosphate cyclase [Interproscan].","protein_coding"
"AAL22631","STM3773","Salmonella enterica","putative NtrC family transcriptional regulator [Ensembl]. PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AAL22844","STM4005","Salmonella enterica","EBP family response regulator in two-component regulatory system with GlnL [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AAL23352","STM4534","Salmonella enterica","putative NtrC family transcriptional regulator, ATPase domain protein [Ensembl]. PRD domain, Sigma-54 interaction domain, PTS system fructose IIA component [Interproscan].","protein_coding"
"AEA92704","levR","Enterococcus faecalis","transcriptional regulatory protein LevR [Ensembl]. PRD domain, Sigma-54 interaction domain, PTS system fructose IIA component [Interproscan].","protein_coding"
"AEA93430","OG1RF_10743","Enterococcus faecalis","sigma-54 interaction domain protein [Ensembl]. PRD domain, Sigma-54 interaction domain, PTS system fructose IIA component [Interproscan].","protein_coding"
"AEA94304","OG1RF_11617","Enterococcus faecalis","sigma-54 dependent DNA-binding response regulator [Ensembl]. PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"AEA94950","OG1RF_12263","Enterococcus faecalis","sigma-54 dependent DNA-binding response regulator [Ensembl]. PRD domain, Sigma-54 interaction domain, PTS system fructose IIA component [Interproscan].","protein_coding"
"AEA95167","OG1RF_12480","Enterococcus faecalis","DEAH-box family ATP-dependent helicase [Ensembl]. PRD domain, Sigma-54 interaction domain, PTS system fructose IIA component [Interproscan].","protein_coding"
"AGT22477","N559_0682","Klebsiella pneumoniae","DNA-binding transcriptional regulator DhaR [Ensembl]. GAF domain, Sigma-54 interaction domain, RNA polymerase sigma factor 54 interaction domain, DNA binding HTH domain, Fis family [InterProScan].","protein_coding"
"AGT22853","N559_1079","Klebsiella pneumoniae","sigma-54 dependent transcriptional regulator [Ensembl]. Sigma-54 interaction domain, DNA binding HTH domain, RNA polymerase sigma factor 54 interaction domain, Fis family [InterProScan].","protein_coding"
"AGT22935","N559_1166","Klebsiella pneumoniae","formate hydrogenlyase transcriptional activator FhlA [Ensembl]. Sigma-54 interaction domain, GAF domain, RNA polymerase sigma factor 54 interaction domain [InterProScan].","protein_coding"
"AGT22959","N559_1193","Klebsiella pneumoniae","anaerobic nitric oxide reductase transcription regulator [Ensembl]. GAF domain, Sigma-54 interaction domain, RNA polymerase sigma factor 54 interaction domain [InterProScan].","protein_coding"
"AGT23137","N559_1375","Klebsiella pneumoniae","putative 2-component transcriptional regulator [Ensembl]. Response regulator receiver domain, Sigma-54 interaction domain, RNA polymerase sigma factor 54 interaction domain [InterProScan].","protein_coding"
"AGT24264","N559_2586","Klebsiella pneumoniae","phosphoglycerate transport activator [Ensembl]. Response regulator receiver domain, Sigma-54 interaction domain, DNA binding HTH domain, RNA polymerase sigma factor 54 interaction domain, Fis family [InterProScan].","protein_coding"
"AGT25417","N559_3781","Klebsiella pneumoniae","putative inner membrane protein [Ensembl]. PRD domain, Sigma-54 interaction domain, RNA polymerase sigma factor 54 interaction domain [InterProScan].","protein_coding"
"AGT26093","N559_4488","Klebsiella pneumoniae","sigma-54 dependent transcriptional regulator [Ensembl]. PRD domain, Sigma-54 interaction domain, RNA polymerase sigma factor 54 interaction domain [InterProScan].","protein_coding"
"AGT26495","N559_4911","Klebsiella pneumoniae","fused DNA-binding response regulator [Ensembl]. Response regulator receiver domain, Sigma-54 interaction domain, DNA binding HTH domain, RNA polymerase sigma factor 54 interaction domain, Fis family [InterProScan].","protein_coding"
"AGT26682","N559_5106","Klebsiella pneumoniae","nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain, RNA polymerase sigma factor 54 interaction domain, DNA binding HTH domain, Fis family [InterProScan].","protein_coding"
"AHY40231","CJ8421_05085","Campylobacter jejuni","Signal-transduction regulatory protein FlgR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AKI48736","L2625_00806","Listeria monocytogenes","sigma-54 dependent transcriptional regulator, putative [Ensembl]. Phosphotransferase system, PRD domain, RNA polymerase sigma factor 54 interaction domain [Interproscan].","protein_coding"
"AKI49715","L2625_01856","Listeria monocytogenes","sigma-54 interaction domain protein [Ensembl]. RNA polymerase sigma factor 54 interaction domain, PRD domain, Phosphotransferase system [Interproscan].","protein_coding"
"AKI50171","L2625_02335","Listeria monocytogenes","sigma-54 dependent transcriptional regulator [Ensembl]. RNA polymerase sigma factor 54 interaction domain, DNA binding HTH domain [Interproscan].","protein_coding"
"AKP15094","glnG","Neisseria gonorrhoeae","Nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"AKP15503","zraR","Neisseria gonorrhoeae","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CBI66461","ntrC","Helicobacter pylori","two-component system, NtrC family, response regulator [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain [Interproscan].","protein_coding"
"CCL16976","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. PAS domain, Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL17027","No alias","Clostridioides difficile","Sigma-54 factor, interaction domain-containing protein,transcriptional regulatory protein levr [Ensembl]. PTS system fructose IIA component, PRD domain, Sugar-specific transcriptional regulator TrmB, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL17338","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL17955","No alias","Clostridioides difficile","Two-component response regulator [Ensembl]. Response regulator receiver domain, Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL18291","No alias","Clostridioides difficile","Transcription antiterminator, PTS operon regulator [Ensembl]. PTS system fructose IIA component, PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL18448","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL18680","No alias","Clostridioides difficile","Transcription antiterminator, PTS operon regulator [Ensembl]. PTS system fructose IIA component, Phosphoenolpyruvate-dependent sugar phosphotransferase system, PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL18724","No alias","Clostridioides difficile","Transcription antiterminator, PTS operon regulator [Ensembl]. PTS system fructose IIA component, Phosphoenolpyruvate-dependent sugar phosphotransferase system, PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19165","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54 dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19199","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19358","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19364","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Propionate catabolism activator, Bacterial regulatory protein, PAS fold, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19535","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19632","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19686","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. PAS domain, Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19725","prdR","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. PAS domain, Bacterial regulatory protein, CBS domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19762","No alias","Clostridioides difficile","Transcription antiterminator, PTS operon regulator [Ensembl]. PTS system fructose IIA component, PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL19910","No alias","Clostridioides difficile","Transcriptional regulator, sigma-54-dependent [Ensembl]. Bacterial regulatory protein, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL20315","No alias","Clostridioides difficile","Transcription antiterminator [Ensembl]. PTS system fructose IIA component, PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCL20518","No alias","Clostridioides difficile","Transcription antiterminator, PTS operon regulator [Ensembl]. PTS system fructose IIA component, Phosphoenolpyruvate-dependent sugar phosphotransferase system, PRD domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CCP43706","No alias","Mycobacterium tuberculosis","Possible magnesium chelatase [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRN65608","qseF","Pseudomonas aeruginosa","Quorum-sensing regulator protein F [Ensembl]. Sigma-54 interaction domain, Regulator of RNA terminal phosphate cyclase [Interproscan].","protein_coding"
"CRN66268","zraR_1","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRN70797","tyrR_1","Pseudomonas aeruginosa","Transcriptional regulatory protein TyrR [Ensembl]. PAS fold, ACT domain, Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRN78675","acoR_1","Pseudomonas aeruginosa","Acetoin catabolism regulatory protein [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRN86585","zraR_2","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRN98070","norR2","Pseudomonas aeruginosa","Nitric oxide reductase transcription regulator norR2 [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRO21544","zraR_3","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Response regulator receiver domain [Interproscan].","protein_coding"
"CRO39560","dctD_1","Pseudomonas aeruginosa","C4-dicarboxylate transport transcriptional regulatory protein DctD [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRO45240","ntrC_1","Pseudomonas aeruginosa","Nitrogen assimilation regulatory protein [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRO45386","zraR_4","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRO60964","acoR_2","Pseudomonas aeruginosa","Acetoin catabolism regulatory protein [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRO96924","No alias","Pseudomonas aeruginosa","(S)-limonene 6-monooxygenase [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRP14713","prpR_1","Pseudomonas aeruginosa","Propionate catabolism operon regulatory protein [Ensembl]. Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRP27004","zraR_5","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRP41187","prpR_2","Pseudomonas aeruginosa","Propionate catabolism operon regulatory protein [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein, Propionate catabolism activator [Interproscan].","protein_coding"
"CRP48388","glnG","Pseudomonas aeruginosa","Nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP50008","dctD_2","Pseudomonas aeruginosa","C4-dicarboxylate transport transcriptional regulatory protein DctD [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP62097","rocR","Pseudomonas aeruginosa","Arginine utilization regulatory protein RocR [Ensembl]. PAS fold, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"CRP68728","tyrR_2","Pseudomonas aeruginosa","Transcriptional regulatory protein TyrR [Ensembl]. PAS domain, Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"CRP72464","dctD_3","Pseudomonas aeruginosa","C4-dicarboxylate transport transcriptional regulatory protein DctD [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP73274","algB_2","Pseudomonas aeruginosa","Alginate biosynthesis transcriptional regulatory protein AlgB [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP79684","zraR_6","Pseudomonas aeruginosa","Transcriptional regulatory protein ZraR [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"CRP79731","ntrC_2","Pseudomonas aeruginosa","Nitrogen assimilation regulatory protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Flagellar regulatory protein FleQ [Interproscan].","protein_coding"
"EDJ91589","CGSHi22421_07457","Haemophilus influenzae","transcriptional regulatory protein [Ensembl]. Helix-turn-helix domain, Sigma-54 interaction domain [Interproscan].","protein_coding"
"KNA50400","VCV51_031426","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA50402","VCV51_031428","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Flagellar regulatory protein FleQ [Interproscan].","protein_coding"
"KNA54612","VCV51_030713","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA55086","VCV51_031847","Vibrio cholerae ","nitrogen regulation protein NR(I) [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA55256","VCV51_033069","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA57440","VCV51_032836","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"KNA58588","VCV51_031119","Vibrio cholerae ","psp operon transcriptional activator [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"KNA58956","VCV51_031243","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. GAF domain, Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"KNA59396","VCV51_031296","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA60650","VCV51_032089","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein, Response regulator receiver domain [Interproscan].","protein_coding"
"KNA60673","VCV51_032112","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. Sigma-54 interaction domain, Bacterial regulatory protein [Interproscan].","protein_coding"
"KNA60791","VCV51_032053","Vibrio cholerae ","sigma-54 interaction domain-containing protein [Ensembl]. GAF domain, Sigma-54 interaction domain [Interproscan].","protein_coding"