AAC75590 (hcaR, b2537)

Aliases : hcaR, b2537

Description : hca operon transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AAC75590
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AAL22693	STM3834	putative LysR family transcriptional regulator...	0.05	OrthoFinder
AGT22920	N559_1151	putative LysR-family transcriptional regulator...	0.04	OrthoFinder
AGT23181	N559_1423	LysR family transcriptional regulator [Ensembl]. LysR...	0.05	OrthoFinder
AGT23255	N559_1502	putative LysR-family transcriptional regulator...	0.03	OrthoFinder
AGT23273	N559_1520, CynR	DNA-binding transcriptional regulator CynR [Ensembl]....	0.04	OrthoFinder
AGT23557	N559_1823	HTH-type transcriptional regulator cbl [Ensembl]. LysR...	0.05	OrthoFinder
AGT23946	N559_2239	LysR family transcriptional regulator [Ensembl]. LysR...	0.07	OrthoFinder
AGT24294	N559_2618, LysR	transcriptional regulator LysR [Ensembl]. LysR substrate...	0.05	OrthoFinder
AGT24322	N559_2646, LysR	transcriptional regulator LysR [Ensembl]. LysR substrate...	0.05	OrthoFinder
AGT24668	N559_3005, CysB	transcriptional regulator CysB [Ensembl]. LysR substrate...	0.04	OrthoFinder
AGT24793	N559_3132	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
AGT26415	N559_4829	LysR family transcriptional regulator [Ensembl]. LysR...	0.03	OrthoFinder
AGT26618	N559_5041	putative LysR-family transcriptional regulator...	0.05	OrthoFinder
AKI48437	L2625_00496	transcriptional regulator, LysR family [Ensembl]....	0.03	OrthoFinder
CCG27021	No alias	Transcriptional regulators, LysR family [Ensembl]. LysR...	0.03	OrthoFinder
CRN70888	gltC_1	HTH-type transcriptional regulator GltC [Ensembl]. LysR...	0.03	OrthoFinder
CRN91471	yofA_1	HTH-type transcriptional regulator YofA [Ensembl]. LysR...	0.03	OrthoFinder
CRO37348	benM_3	Ben and cat operon transcriptional regulator [Ensembl]....	0.05	OrthoFinder
CRP00540	cysL_3	CysJI operon transcriptional activator [Ensembl]. LysR...	0.03	OrthoFinder
CRP03013	gltC_5	HTH-type transcriptional regulator GltC [Ensembl]. LysR...	0.03	OrthoFinder
CRP05348	cmpR_4	HTH-type transcriptional activator CmpR [Ensembl]. LysR...	0.03	OrthoFinder
CRP53545	cynR_8	Cyn operon transcriptional activator [Ensembl]. LysR...	0.06	OrthoFinder
EDJ91352	CGSHi22421_04593	putative HTH-type transcriptional regulator [Ensembl]....	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005887	integral component of plasma membrane	IEP	Enrichment
MF	GO:0008028	monocarboxylic acid transmembrane transporter activity	IEP	Enrichment
MF	GO:0015129	lactate transmembrane transporter activity	IEP	Enrichment
BP	GO:0015727	lactate transport	IEP	Enrichment
BP	GO:0015850	organic hydroxy compound transport	IEP	Enrichment
MF	GO:0016491	oxidoreductase activity	IEP	Enrichment
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
CC	GO:0031226	intrinsic component of plasma membrane	IEP	Enrichment
MF	GO:0048029	monosaccharide binding	IEP	Enrichment
MF	GO:1901618	organic hydroxy compound transmembrane transporter activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000847	Tscrpt_reg_HTH_LysR	3	62
IPR005119	LysR_subst-bd	88	291

External Links

UniProtKB	Q47141

AAC75590 (hcaR, b2537)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation