AAC75590 (hcaR, b2537)


Aliases : hcaR, b2537

Description : hca operon transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].


Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC75590
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AAL22693 STM3834 putative LysR family transcriptional regulator... 0.05 OrthoFinder
AGT22920 N559_1151 putative LysR-family transcriptional regulator... 0.04 OrthoFinder
AGT23181 N559_1423 LysR family transcriptional regulator [Ensembl]. LysR... 0.05 OrthoFinder
AGT23255 N559_1502 putative LysR-family transcriptional regulator... 0.03 OrthoFinder
AGT23273 N559_1520, CynR DNA-binding transcriptional regulator CynR [Ensembl].... 0.04 OrthoFinder
AGT23557 N559_1823 HTH-type transcriptional regulator cbl [Ensembl]. LysR... 0.05 OrthoFinder
AGT23946 N559_2239 LysR family transcriptional regulator [Ensembl]. LysR... 0.07 OrthoFinder
AGT24294 N559_2618, LysR transcriptional regulator LysR [Ensembl]. LysR substrate... 0.05 OrthoFinder
AGT24322 N559_2646, LysR transcriptional regulator LysR [Ensembl]. LysR substrate... 0.05 OrthoFinder
AGT24668 N559_3005, CysB transcriptional regulator CysB [Ensembl]. LysR substrate... 0.04 OrthoFinder
AGT24793 N559_3132 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT26415 N559_4829 LysR family transcriptional regulator [Ensembl]. LysR... 0.03 OrthoFinder
AGT26618 N559_5041 putative LysR-family transcriptional regulator... 0.05 OrthoFinder
AKI48437 L2625_00496 transcriptional regulator, LysR family [Ensembl].... 0.03 OrthoFinder
CCG27021 No alias Transcriptional regulators, LysR family [Ensembl]. LysR... 0.03 OrthoFinder
CRN70888 gltC_1 HTH-type transcriptional regulator GltC [Ensembl]. LysR... 0.03 OrthoFinder
CRN91471 yofA_1 HTH-type transcriptional regulator YofA [Ensembl]. LysR... 0.03 OrthoFinder
CRO37348 benM_3 Ben and cat operon transcriptional regulator [Ensembl].... 0.05 OrthoFinder
CRP00540 cysL_3 CysJI operon transcriptional activator [Ensembl]. LysR... 0.03 OrthoFinder
CRP03013 gltC_5 HTH-type transcriptional regulator GltC [Ensembl]. LysR... 0.03 OrthoFinder
CRP05348 cmpR_4 HTH-type transcriptional activator CmpR [Ensembl]. LysR... 0.03 OrthoFinder
CRP53545 cynR_8 Cyn operon transcriptional activator [Ensembl]. LysR... 0.06 OrthoFinder
EDJ91352 CGSHi22421_04593 putative HTH-type transcriptional regulator [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEP Enrichment
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP Enrichment
MF GO:0015129 lactate transmembrane transporter activity IEP Enrichment
BP GO:0015727 lactate transport IEP Enrichment
BP GO:0015850 organic hydroxy compound transport IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:1901618 organic hydroxy compound transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 3 62
IPR005119 LysR_subst-bd 88 291
UniProtKB Q47141