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Aliases : raiA, b2597
Description : cold shock protein associated with 30S ribosomal subunit [Ensembl]. Sigma 54 modulation protein / S30EA ribosomal protein [Interproscan].
Gene families : OG_02_0000405 (OrthoFinder) Phylogenetic Tree(s): OG0000405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAC75646 | |
| Cluster | HCCA: Cluster_13 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL21554 | STM2665, yfiA | ribosome associated factor [Ensembl]. Sigma 54... | 0.11 | OrthoFinder | |
| AAL22190 | STM3321, yhbH | putative sigma N modulation factor [Ensembl]. Sigma 54... | 0.05 | OrthoFinder | |
| AGT23098 | N559_1336 | sigma-54 modulation protein [Ensembl]. | 0.11 | OrthoFinder | |
| KNA55034 | VCV51_031707 | sigma 54 modulation protein/S30EA ribosomal protein... | 0.04 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0044238 | primary metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004611 | phosphoenolpyruvate carboxykinase activity | IEP | Enrichment |
| MF | GO:0004612 | phosphoenolpyruvate carboxykinase (ATP) activity | IEP | Enrichment |
| MF | GO:0004784 | superoxide dismutase activity | IEP | Enrichment |
| MF | GO:0004857 | enzyme inhibitor activity | IEP | Enrichment |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Enrichment |
| MF | GO:0004867 | serine-type endopeptidase inhibitor activity | IEP | Enrichment |
| MF | GO:0005506 | iron ion binding | IEP | Enrichment |
| BP | GO:0006801 | superoxide metabolic process | IEP | Enrichment |
| BP | GO:0006873 | cellular ion homeostasis | IEP | Enrichment |
| BP | GO:0006875 | cellular metal ion homeostasis | IEP | Enrichment |
| BP | GO:0006879 | cellular iron ion homeostasis | IEP | Enrichment |
| MF | GO:0008199 | ferric iron binding | IEP | Enrichment |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | Enrichment |
| BP | GO:0019725 | cellular homeostasis | IEP | Enrichment |
| BP | GO:0030003 | cellular cation homeostasis | IEP | Enrichment |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Enrichment |
| BP | GO:0042592 | homeostatic process | IEP | Enrichment |
| BP | GO:0046916 | cellular transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0048878 | chemical homeostasis | IEP | Enrichment |
| BP | GO:0050801 | ion homeostasis | IEP | Enrichment |
| BP | GO:0055065 | metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055072 | iron ion homeostasis | IEP | Enrichment |
| BP | GO:0055076 | transition metal ion homeostasis | IEP | Enrichment |
| BP | GO:0055080 | cation homeostasis | IEP | Enrichment |
| BP | GO:0055082 | cellular chemical homeostasis | IEP | Enrichment |
| MF | GO:0061134 | peptidase regulator activity | IEP | Enrichment |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Enrichment |
| BP | GO:0065008 | regulation of biological quality | IEP | Enrichment |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | Enrichment |
| BP | GO:0098771 | inorganic ion homeostasis | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003489 | RHF/RaiA | 4 | 91 |
| UniProtKB | P0AD49 |