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Aliases : casA, b2760
Description : CRISP RNA (crRNA) containing Cascade antiviral complex protein [Ensembl]. CRISPR-associated protein Cse1 (CRISPR_cse1) [Interproscan].
Gene families : OG_02_0004654 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAC75802 | |
| Cluster | HCCA: Cluster_14 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL21823 | STM2943 | putative cytoplasmic protein [Ensembl].... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002376 | immune system process | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| BP | GO:0006955 | immune response | IEP | Enrichment |
| BP | GO:0006996 | organelle organization | IEP | Enrichment |
| BP | GO:0008643 | carbohydrate transport | IEP | Enrichment |
| MF | GO:0008982 | protein-N(PI)-phosphohistidine-sugar phosphotransferase activity | IEP | Enrichment |
| BP | GO:0009401 | phosphoenolpyruvate-dependent sugar phosphotransferase system | IEP | Enrichment |
| BP | GO:0009605 | response to external stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| BP | GO:0009615 | response to virus | IEP | Enrichment |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
| MF | GO:0022804 | active transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0043207 | response to external biotic stimulus | IEP | Enrichment |
| BP | GO:0043570 | maintenance of DNA repeat elements | IEP | Enrichment |
| BP | GO:0043571 | maintenance of CRISPR repeat elements | IEP | Enrichment |
| BP | GO:0044419 | biological process involved in interspecies interaction between organisms | IEP | Enrichment |
| BP | GO:0051276 | chromosome organization | IEP | Enrichment |
| BP | GO:0051607 | defense response to virus | IEP | Enrichment |
| BP | GO:0051707 | response to other organism | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0098542 | defense response to other organism | IEP | Enrichment |
| BP | GO:0140546 | defense response to symbiont | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013381 | CRISPR-assoc_prot_Cse1 | 2 | 459 |
| UniProtKB | Q46901 |