AAC75958 (ygfI, b2921)

Aliases : ygfI, b2921

Description : putative DNA-binding transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].

Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAC75958
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AAL21469 STM2575 putative LysR family transcriptional regulator... 0.03 OrthoFinder
AGT25969 N559_4359 putative LysR-family transcriptional regulator... 0.04 OrthoFinder
AKI48437 L2625_00496 transcriptional regulator, LysR family [Ensembl].... 0.03 OrthoFinder
CPC44234 lysR, ERS093114_00453 LysR family regulatory protein [Ensembl]. LysR substrate... 0.02 OrthoFinder
CPC63513 cidR, ERS093114_00910 LysR family regulatory protein CidR [Ensembl]. LysR... 0.03 OrthoFinder
CRO72193 hcaR_3 Hca operon transcriptional activator [Ensembl]. LysR... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003986 acetyl-CoA hydrolase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0006083 acetate metabolic process IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0008775 acetate CoA-transferase activity IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
BP GO:0019541 propionate metabolic process IEP Enrichment
BP GO:0019679 propionate metabolic process, methylcitrate cycle IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0046459 short-chain fatty acid metabolic process IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR005119 LysR_subst-bd 89 281
IPR000847 Tscrpt_reg_HTH_LysR 8 65
UniProtKB P52044