Aliases : ygfI, b2921
Description : putative DNA-binding transcriptional regulator [Ensembl]. LysR substrate binding domain, Bacterial regulatory helix-turn-helix protein [Interproscan].
Gene families : OG_02_0000002 (OrthoFinder) Phylogenetic Tree(s): OG0000002_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAC75958 | |
Cluster | HCCA: Cluster_10 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL21469 | STM2575 | putative LysR family transcriptional regulator... | 0.03 | OrthoFinder | |
AGT25969 | N559_4359 | putative LysR-family transcriptional regulator... | 0.04 | OrthoFinder | |
AKI48437 | L2625_00496 | transcriptional regulator, LysR family [Ensembl].... | 0.03 | OrthoFinder | |
CPC44234 | lysR, ERS093114_00453 | LysR family regulatory protein [Ensembl]. LysR substrate... | 0.02 | OrthoFinder | |
CPC63513 | cidR, ERS093114_00910 | LysR family regulatory protein CidR [Ensembl]. LysR... | 0.03 | OrthoFinder | |
CRO72193 | hcaR_3 | Hca operon transcriptional activator [Ensembl]. LysR... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003986 | acetyl-CoA hydrolase activity | IEP | Enrichment |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
MF | GO:0004764 | shikimate 3-dehydrogenase (NADP+) activity | IEP | Enrichment |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Enrichment |
BP | GO:0006083 | acetate metabolic process | IEP | Enrichment |
BP | GO:0007155 | cell adhesion | IEP | Enrichment |
MF | GO:0008410 | CoA-transferase activity | IEP | Enrichment |
MF | GO:0008775 | acetate CoA-transferase activity | IEP | Enrichment |
CC | GO:0009289 | pilus | IEP | Enrichment |
MF | GO:0016289 | CoA hydrolase activity | IEP | Enrichment |
MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | Enrichment |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
BP | GO:0019541 | propionate metabolic process | IEP | Enrichment |
BP | GO:0019679 | propionate metabolic process, methylcitrate cycle | IEP | Enrichment |
BP | GO:0022610 | biological adhesion | IEP | Enrichment |
CC | GO:0042995 | cell projection | IEP | Enrichment |
BP | GO:0046459 | short-chain fatty acid metabolic process | IEP | Enrichment |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Enrichment |
UniProtKB | P52044 |