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AAC76234 (rpoN, b3202)


Aliases : rpoN, b3202

Description : RNA polymerase, sigma 54 (sigma N) factor [Ensembl]. Sigma-54 factor [Interproscan].


Gene families : OG_02_0000919 (OrthoFinder) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAC76234
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AGT22353 N559_0555 RNA polymerase factor sigma-54 [Ensembl]. DNA binding... 0.01 OrthoFinder
AKP15199 rpoN, WX61_01150 RNA polymerase sigma-54 factor [Ensembl]. Sigma-54... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0001216 DNA-binding transcription activator activity IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006352 DNA-templated transcription, initiation IEA Interproscan
MF GO:0016987 sigma factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
InterPro domains Description Start Stop
IPR000394 RNA_pol_sigma_54 5 48
IPR007634 RNA_pol_sigma_54_DNA-bd 317 475
IPR007046 RNA_pol_sigma_54_core-bd 114 303
UniProtKB P24255