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Aliases : hpf, b3203
Description : ribosome hibernation promoting factor HPF; stabilizes 100S dimers [Ensembl]. Sigma 54 modulation protein / S30EA ribosomal protein [Interproscan].
Gene families : OG_02_0000405 (OrthoFinder) Phylogenetic Tree(s): OG0000405_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAC76235 | |
| Cluster | HCCA: Cluster_46 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL21554 | STM2665, yfiA | ribosome associated factor [Ensembl]. Sigma 54... | 0.03 | OrthoFinder | |
| AAL22190 | STM3321, yhbH | putative sigma N modulation factor [Ensembl]. Sigma 54... | 0.07 | OrthoFinder | |
| AGT22352 | N559_0554 | putative sigma(54) modulation protein [Ensembl]. | 0.06 | OrthoFinder | |
| AGT23098 | N559_1336 | sigma-54 modulation protein [Ensembl]. | 0.06 | OrthoFinder | |
| KNA55034 | VCV51_031707 | sigma 54 modulation protein/S30EA ribosomal protein... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0044238 | primary metabolic process | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| MF | GO:0004521 | endoribonuclease activity | IEP | Enrichment |
| MF | GO:0004540 | ribonuclease activity | IEP | Enrichment |
| MF | GO:0004645 | 1,4-alpha-oligoglucan phosphorylase activity | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| BP | GO:0007154 | cell communication | IEP | Enrichment |
| BP | GO:0007267 | cell-cell signaling | IEP | Enrichment |
| MF | GO:0008184 | glycogen phosphorylase activity | IEP | Enrichment |
| BP | GO:0009372 | quorum sensing | IEP | Enrichment |
| BP | GO:0009595 | detection of biotic stimulus | IEP | Enrichment |
| BP | GO:0009607 | response to biotic stimulus | IEP | Enrichment |
| MF | GO:0015035 | protein-disulfide reductase activity | IEP | Enrichment |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Enrichment |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Enrichment |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Enrichment |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Enrichment |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | Enrichment |
| BP | GO:0023052 | signaling | IEP | Enrichment |
| MF | GO:0043768 | S-ribosylhomocysteine lyase activity | IEP | Enrichment |
| BP | GO:0044764 | multi-organism cellular process | IEP | Enrichment |
| BP | GO:0051606 | detection of stimulus | IEP | Enrichment |
| BP | GO:0051704 | multi-organism process | IEP | Enrichment |
| BP | GO:0060245 | detection of cell density | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003489 | RHF/RaiA | 3 | 93 |
| UniProtKB | P0AFX0 |