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Aliases : rsmD, b3465
Description : 16S rRNA m(2)G966 methyltransferase, SAM-dependent [Ensembl]. Conserved hypothetical protein 95 [Interproscan].
Gene families : OG_02_0000649 (OrthoFinder) Phylogenetic Tree(s): OG0000649_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AAC76490 | |
| Cluster | HCCA: Cluster_39 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAL22432 | STM3572, yhhF | putative methyltransferase [Ensembl]. Conserved... | 0.05 | OrthoFinder | |
| AGT22142 | N559_0323 | RsmD family RNA methyltransferase [Ensembl]. | 0.07 | OrthoFinder | |
| CRP24283 | rsmD | Ribosomal RNA small subunit methyltransferase D... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003908 | methylated-DNA-[protein]-cysteine S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0004140 | dephospho-CoA kinase activity | IEP | Enrichment |
| MF | GO:0004180 | carboxypeptidase activity | IEP | Enrichment |
| MF | GO:0004185 | serine-type carboxypeptidase activity | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Enrichment |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Enrichment |
| MF | GO:0008238 | exopeptidase activity | IEP | Enrichment |
| BP | GO:0008616 | queuosine biosynthetic process | IEP | Enrichment |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | Enrichment |
| MF | GO:0008990 | rRNA (guanine-N2-)-methyltransferase activity | IEP | Enrichment |
| MF | GO:0009002 | serine-type D-Ala-D-Ala carboxypeptidase activity | IEP | Enrichment |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009119 | ribonucleoside metabolic process | IEP | Enrichment |
| BP | GO:0009163 | nucleoside biosynthetic process | IEP | Enrichment |
| CC | GO:0009295 | nucleoid | IEP | Enrichment |
| BP | GO:0015936 | coenzyme A metabolic process | IEP | Enrichment |
| BP | GO:0015937 | coenzyme A biosynthetic process | IEP | Enrichment |
| MF | GO:0016435 | rRNA (guanine) methyltransferase activity | IEP | Enrichment |
| MF | GO:0016657 | oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0017171 | serine hydrolase activity | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| MF | GO:0033739 | preQ1 synthase activity | IEP | Enrichment |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0033866 | nucleoside bisphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0034030 | ribonucleoside bisphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Enrichment |
| BP | GO:0034033 | purine nucleoside bisphosphate biosynthetic process | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0046116 | queuosine metabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Enrichment |
| MF | GO:0070008 | serine-type exopeptidase activity | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | Enrichment |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Enrichment |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Enrichment |
| BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| UniProtKB | P0ADX9 |