AAC76597 (ysaA, b3573)

Aliases : ysaA, b3573

Description : putative hydrogenase, 4Fe-4S ferredoxin-type component [Ensembl]. 4Fe-4S dicluster domain [Interproscan].

Gene families : OG_02_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAC76597
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAL19900 STM0965, dmsB anaerobic dimethyl sulfoxide reductase, subunit B... 0.09 OrthoFinder
AAL20416 STM1497 putative dimethyl sulphoxide reductase [Ensembl]. 4Fe-4S... 0.08 OrthoFinder
AAL20968 STM2064, phsB hydrogen sulfide production iron-sulfur subunit... 0.05 OrthoFinder
AAL21421 STM2527 putative polyferredoxin [Ensembl]. 4Fe-4S binding... 0.01 OrthoFinder
AAL21423 STM2529 putative anaerobic dimethylsulfoxide reductase... 0.03 OrthoFinder
AAL22525 STM3666, ysaA putative oxidoreductase [Ensembl]. 4Fe-4S dicluster... 0.13 OrthoFinder
AAL23103 STM4279, nrfC putative formate-dependent nitrite reductase [Ensembl].... 0.11 OrthoFinder
AAL23130 STM4306 putative anaerobic dimethyl sulfoxide reductase, subunit... 0.04 OrthoFinder
AGT22941 N559_1174 4Fe-4S ferredoxin iron-sulfur binding domain protein... 0.04 OrthoFinder
AGT24419 N559_2746 anaerobic dimethyl sulfoxide (DMSO) reductase, subunit B... 0.05 OrthoFinder
AGT25008 N559_3352 anaerobic dimethyl sulfoxide reductase subunit B... 0.07 OrthoFinder
EDJ91840 CGSHi22421_08793 anaerobic dimethyl sulfoxide reductase chain B... 0.03 OrthoFinder
EDJ91860 pyrH, CGSHi22421_08893 uridylate kinase [Ensembl]. 4Fe-4S dicluster domain... 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001514 selenocysteine incorporation IEP Enrichment
MF GO:0004371 glycerone kinase activity IEP Enrichment
MF GO:0004418 hydroxymethylbilane synthase activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0006012 galactose metabolic process IEP Enrichment
BP GO:0006106 fumarate metabolic process IEP Enrichment
BP GO:0006451 translational readthrough IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008108 UDP-glucose:hexose-1-phosphate uridylyltransferase activity IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
CC GO:0009425 bacterial-type flagellum basal body IEP Enrichment
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016625 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0043648 dicarboxylic acid metabolic process IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 55 142
UniProtKB P56256