Aliases : fimD, b4317
Description : fimbrial usher outer membrane porin protein; FimCD chaperone-usher [Ensembl]. PapC C-terminal domain, PapC N-terminal domain, Outer membrane usher protein [Interproscan].
Gene families : OG_02_0000166 (OrthoFinder) Phylogenetic Tree(s): OG0000166_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AAC77273 | |
Cluster | HCCA: Cluster_5 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL19500 | STM0546, fimD | outer membrane usher protein [Ensembl]. PapC N-terminal... | 0.05 | OrthoFinder | |
AGT22732 | N559_0945, FimD | outer membrane usher protein FimD [Ensembl]. PapC... | 0.4 | OrthoFinder | |
AGT23011 | N559_1247 | fimbrial usher protein [Ensembl]. PapC N-terminal... | 0.03 | OrthoFinder | |
AGT23014 | N559_1250 | outer membrane protein; export and assembly of type 1... | 0.04 | OrthoFinder | |
AGT24313 | N559_2637 | fimbrial usher protein [Ensembl]. PapC N-terminal... | 0.02 | OrthoFinder | |
AGT25491 | N559_3855 | fimbrial usher protein [Ensembl]. PapC N-terminal... | 0.04 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0009297 | pilus assembly | IEA | Interproscan |
MF | GO:0015473 | fimbrial usher porin activity | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0007155 | cell adhesion | IEP | Enrichment |
CC | GO:0009289 | pilus | IEP | Enrichment |
BP | GO:0022610 | biological adhesion | IEP | Enrichment |
CC | GO:0042995 | cell projection | IEP | Enrichment |
UniProtKB | P30130 |