AAD13446 (csqR, b3884)

Aliases : csqR, b3884

Description : putative transcriptional regulator for sulphoquinovose utilization [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain [Interproscan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AAD13446
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AAL21799 STM2919, ygbI putative regulatory protein, deoR family [Ensembl]. DeoR... 0.04 OrthoFinder
AGT24279 N559_2603 DeoR transcriptional regulator [Ensembl]. DeoR-like... 0.07 OrthoFinder
KNA49522 VCV51_033798 deoR family Bacterial regulatory protein [Ensembl]. DeoR... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
InterPro domains Description Start Stop
IPR014036 DeoR_C 79 237
IPR001034 DeoR_HTH 11 66
UniProtKB P32144