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  5. AAT48138

AAT48138 (araH, b4460)


Aliases : araH, b4460

Description : L-arabinose ABC transporter permease [Ensembl]. Branched-chain amino acid transport system / permease component [Interproscan].


Gene families : OG_02_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AAT48138
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76592 xylH, b3568 D-xylose ABC transporter permease [Ensembl].... 0.04 OrthoFinder
AAL21092 STM2188, mglC methyl-galactoside transport protein [Ensembl].... 0.04 OrthoFinder
AAL22915 STM4075, ydeY putative sugar transport protein [Ensembl].... 0.03 OrthoFinder
AAL22916 STM4076, ydeZ putative sugar transport protein [Ensembl].... 0.06 OrthoFinder
AGT22462 N559_0666 putative transport system permease component [Ensembl]. 0.03 OrthoFinder
AGT26146 N559_4543 ribose high-affinity ABC transporter permease component... 0.06 OrthoFinder
AGT26147 N559_4544 ribose high-affinity ABC transporter permease component... 0.06 OrthoFinder
AGT26649 N559_5072 rhamnose ABC transport system permease component [Ensembl]. 0.03 OrthoFinder
EDJ91405 CGSHi22421_04858 beta-methylgalactoside transporter inner membrane... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0004357 glutamate-cysteine ligase activity IEP Enrichment
MF GO:0004555 alpha,alpha-trehalase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
MF GO:0005283 amino acid:sodium symporter activity IEP Enrichment
MF GO:0005343 organic acid:sodium symporter activity IEP Enrichment
MF GO:0005416 amino acid:cation symporter activity IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005991 trehalose metabolic process IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
BP GO:0009112 nucleobase metabolic process IEP Enrichment
BP GO:0010035 response to inorganic substance IEP Enrichment
BP GO:0010038 response to metal ion IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015171 amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015655 alanine:sodium symporter activity IEP Enrichment
BP GO:0015804 neutral amino acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
MF GO:0015927 trehalase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016881 acid-amino acid ligase activity IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
MF GO:0022858 alanine transmembrane transporter activity IEP Enrichment
BP GO:0032328 alanine transport IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0046112 nucleobase biosynthetic process IEP Enrichment
BP GO:0046688 response to copper ion IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
BP GO:1903825 organic acid transmembrane transport IEP Enrichment
BP GO:1905039 carboxylic acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 58 315
UniProtKB P0AE26