EDJ90069 (CGSHi22421_09761)


Aliases : CGSHi22421_09761

Description : hypothetical protein [Ensembl]. LamB/YcsF family [Interproscan].


Gene families : OG_02_0001052 (OrthoFinder) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90069
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC73807 pxpA, b0713 UPF0271 family protein [Ensembl]. LamB/YcsF family... 0.03 OrthoFinder
AAL19658 STM0714, ybgL putative lactam utilization protein [Ensembl]. LamB/YcsF... 0.05 OrthoFinder
CPC83330 ERS093114_01433 Lactam utilization protein LAMB [Ensembl]. LamB/YcsF... 0.02 OrthoFinder
CRN81967 No alias LamB/YcsF family protein [Ensembl]. LamB/YcsF family... 0.03 OrthoFinder
CRO86339 No alias LamB/YcsF family protein [Ensembl]. LamB/YcsF family... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP Enrichment
MF GO:0003919 FMN adenylyltransferase activity IEP Enrichment
MF GO:0004000 adenosine deaminase activity IEP Enrichment
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Enrichment
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Enrichment
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Enrichment
BP GO:0006382 adenosine to inosine editing IEP Enrichment
BP GO:0006534 cysteine metabolic process IEP Enrichment
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP Enrichment
MF GO:0008531 riboflavin kinase activity IEP Enrichment
MF GO:0008716 D-alanine-D-alanine ligase activity IEP Enrichment
BP GO:0009069 serine family amino acid metabolic process IEP Enrichment
BP GO:0009092 homoserine metabolic process IEP Enrichment
MF GO:0015501 glutamate:sodium symporter activity IEP Enrichment
BP GO:0015800 acidic amino acid transport IEP Enrichment
BP GO:0015807 L-amino acid transport IEP Enrichment
BP GO:0015813 L-glutamate transmembrane transport IEP Enrichment
BP GO:0016553 base conversion or substitution editing IEP Enrichment
MF GO:0016783 sulfurtransferase activity IEP Enrichment
BP GO:0019346 transsulfuration IEP Enrichment
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
BP GO:0050667 homocysteine metabolic process IEP Enrichment
BP GO:1902475 L-alpha-amino acid transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR005501 LamB/YcsF/PxpA-like 4 236
No external refs found!