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Aliases : CGSHi22421_09761
Description : hypothetical protein [Ensembl]. LamB/YcsF family [Interproscan].
Gene families : OG_02_0001052 (OrthoFinder) Phylogenetic Tree(s): OG0001052_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EDJ90069 | |
| Cluster | HCCA: Cluster_11 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC73807 | pxpA, b0713 | UPF0271 family protein [Ensembl]. LamB/YcsF family... | 0.03 | OrthoFinder | |
| AAL19658 | STM0714, ybgL | putative lactam utilization protein [Ensembl]. LamB/YcsF... | 0.05 | OrthoFinder | |
| CPC83330 | ERS093114_01433 | Lactam utilization protein LAMB [Ensembl]. LamB/YcsF... | 0.02 | OrthoFinder | |
| CRN81967 | No alias | LamB/YcsF family protein [Ensembl]. LamB/YcsF family... | 0.03 | OrthoFinder | |
| CRO86339 | No alias | LamB/YcsF family protein [Ensembl]. LamB/YcsF family... | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
| BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | Enrichment |
| MF | GO:0003919 | FMN adenylyltransferase activity | IEP | Enrichment |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Enrichment |
| MF | GO:0004590 | orotidine-5'-phosphate decarboxylase activity | IEP | Enrichment |
| BP | GO:0006206 | pyrimidine nucleobase metabolic process | IEP | Enrichment |
| BP | GO:0006207 | 'de novo' pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
| BP | GO:0006382 | adenosine to inosine editing | IEP | Enrichment |
| BP | GO:0006534 | cysteine metabolic process | IEP | Enrichment |
| MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | Enrichment |
| MF | GO:0008531 | riboflavin kinase activity | IEP | Enrichment |
| MF | GO:0008716 | D-alanine-D-alanine ligase activity | IEP | Enrichment |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009092 | homoserine metabolic process | IEP | Enrichment |
| MF | GO:0015501 | glutamate:sodium symporter activity | IEP | Enrichment |
| BP | GO:0015800 | acidic amino acid transport | IEP | Enrichment |
| BP | GO:0015807 | L-amino acid transport | IEP | Enrichment |
| BP | GO:0015813 | L-glutamate transmembrane transport | IEP | Enrichment |
| BP | GO:0016553 | base conversion or substitution editing | IEP | Enrichment |
| MF | GO:0016783 | sulfurtransferase activity | IEP | Enrichment |
| BP | GO:0019346 | transsulfuration | IEP | Enrichment |
| BP | GO:0019856 | pyrimidine nucleobase biosynthetic process | IEP | Enrichment |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Enrichment |
| BP | GO:1902475 | L-alpha-amino acid transmembrane transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005501 | LamB/YcsF/PxpA-like | 4 | 236 |
| No external refs found! |