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  5. EDJ90086

EDJ90086 (CGSHi22421_06568)


Aliases : CGSHi22421_06568

Description : iron (chelated) ABC transporter permease protein [Ensembl]. ABC 3 transport family [Interproscan].


Gene families : OG_02_0000141 (OrthoFinder) Phylogenetic Tree(s): OG0000141_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90086
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AAC74929 znuB, b1859 zinc ABC transporter permease [Ensembl]. ABC 3 transport... 0.01 OrthoFinder
AAL21743 STM2863, sitC fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.04 OrthoFinder
AAL21744 STM2864, sitD fur regulated Salmonella iron transporter [Ensembl]. ABC... 0.03 OrthoFinder
AGT22969 N559_1203 putative ABC transport system permease component... 0.02 OrthoFinder
AKI48124 L2625_00151 zinc ABC transporter, permease protein [Ensembl]. ABC... 0.03 OrthoFinder
AKI49843 mntC, L2625_01990 manganese ABC transporter, permease protein [Ensembl].... 0.02 OrthoFinder
AKP15480 mntB, WX61_01434 Manganese transport system membrane protein MntB... 0.03 OrthoFinder
CRO76540 znuB_1 High-affinity zinc uptake system membrane protein ZnuB... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005887 integral component of plasma membrane IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005342 organic acid transmembrane transporter activity IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006814 sodium ion transport IEP Enrichment
BP GO:0006865 amino acid transport IEP Enrichment
BP GO:0006885 regulation of pH IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity IEP Enrichment
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Enrichment
MF GO:0015171 amino acid transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0015658 branched-chain amino acid transmembrane transporter activity IEP Enrichment
BP GO:0015803 branched-chain amino acid transport IEP Enrichment
BP GO:0015849 organic acid transport IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Enrichment
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0033897 ribonuclease T2 activity IEP Enrichment
MF GO:0043772 acyl-phosphate glycerol-3-phosphate acyltransferase activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP Enrichment
BP GO:0055067 monovalent inorganic cation homeostasis IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
BP GO:0071705 nitrogen compound transport IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001626 ABC_TroCD 10 265
No external refs found!