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  5. EDJ90152

EDJ90152 (CGSHi22421_05967)


Aliases : CGSHi22421_05967

Description : hypothetical protein [Ensembl]. HTH domain, YheO-like PAS domain [Interproscan].


Gene families : OG_02_0001049 (OrthoFinder) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90152
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AAC76371 yheO, b3346 putative PAS domain-containing DNA-binding... 0.03 OrthoFinder
AGT22235 N559_0423 putative regulator [Ensembl]. YheO-like PAS domain, HTH... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
BP GO:0002143 tRNA wobble position uridine thiolation IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
CC GO:0009295 nucleoid IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0034227 tRNA thio-modification IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
InterPro domains Description Start Stop
IPR039445 DauR-like_HTH 157 214
IPR013559 YheO 17 124
No external refs found!