EDJ90229 (rplL, CGSHi22421_05057)


Aliases : rplL, CGSHi22421_05057

Description : 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal protein L7/L12 C-terminal domain, Ribosomal protein L7/L12 dimerisation domain [Interproscan].


Gene families : OG_02_0000364 (OrthoFinder) Phylogenetic Tree(s): OG0000364_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90229
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AAC76960 rplL, b3986 50S ribosomal subunit protein L7/L12 [Ensembl].... 0.05 OrthoFinder
AAL00015 spr1211, rplL 50S Ribosomal protein L12 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AAL22980 STM4152, rplL 50S ribosomal subunit protein L7/L12 [Ensembl].... 0.1 OrthoFinder
AEA94767 rplL2, OG1RF_12080 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
AGT26518 N559_4934 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.04 OrthoFinder
AHY39730 rplL, CJ8421_02385 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CBI65849 rplL, HPB8_292 large subunit ribosomal protein L7/L12 [Ensembl].... 0.06 OrthoFinder
CCG27670 P1/P2 LSU ribosomal protein L7/L12 (P1/P2) [Ensembl].... 0.04 OrthoFinder
CCL20642 rplL, BN171_80007 50S ribosomal protein L7/L12 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCP43395 rplL, Rv0652 50S ribosomal protein L7/L12 RplL (SA1) [Ensembl].... 0.07 OrthoFinder
CPC57334 rplL, ERS093114_00838 50S ribosomalprotein L7/L12 (L23e) [Ensembl]. Ribosomal... 0.06 OrthoFinder
CRO73528 rplL Ribosomal protein 'A' [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
KNA49129 VCV51_030231 ribosomal protein L7/L12 [Ensembl]. Ribosomal protein... 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Enrichment
MF GO:0004089 carbonate dehydratase activity IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Enrichment
MF GO:0004810 tRNA adenylyltransferase activity IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006535 cysteine biosynthetic process from serine IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006563 L-serine metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0009001 serine O-acetyltransferase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009070 serine family amino acid biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
BP GO:0009451 RNA modification IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016412 serine O-acyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
BP GO:0019344 cysteine biosynthetic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
BP GO:0043094 cellular metabolic compound salvage IEP Enrichment
MF GO:0043138 3'-5' DNA helicase activity IEP Enrichment
BP GO:0043174 nucleoside salvage IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
BP GO:1990397 queuosine salvage IEP Enrichment
MF GO:1990817 RNA adenylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR013823 Ribosomal_L7/L12_C 57 123
IPR008932 Ribosomal_L7/L12_oligo 4 51
No external refs found!