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  5. EDJ90476

EDJ90476 (CGSHi22421_06247)


Aliases : CGSHi22421_06247

Description : ribonuclease T [Ensembl]. Exonuclease [Interproscan].


Gene families : OG_02_0002312 (OrthoFinder) Phylogenetic Tree(s): OG0002312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90476
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC74724 rnt, b1652 RNase T; exoribonuclease T; structured DNA 3'... 0.06 OrthoFinder
AGT23998 N559_2295 ribonuclease T [Ensembl]. 0.04 OrthoFinder
CRO09645 rnt Ribonuclease T [Ensembl]. Exonuclease [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000270 peptidoglycan metabolic process IEP Enrichment
BP GO:0002097 tRNA wobble base modification IEP Enrichment
BP GO:0002098 tRNA wobble uridine modification IEP Enrichment
BP GO:0002143 tRNA wobble position uridine thiolation IEP Enrichment
MF GO:0003690 double-stranded DNA binding IEP Enrichment
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Enrichment
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP Enrichment
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006479 protein methylation IEP Enrichment
BP GO:0006481 C-terminal protein methylation IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008171 O-methyltransferase activity IEP Enrichment
BP GO:0008213 protein alkylation IEP Enrichment
MF GO:0008276 protein methyltransferase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008745 N-acetylmuramoyl-L-alanine amidase activity IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Enrichment
BP GO:0010033 response to organic substance IEP Enrichment
MF GO:0010340 carboxyl-O-methyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
BP GO:0018410 C-terminal protein amino acid modification IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0030203 glycosaminoglycan metabolic process IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
BP GO:0034227 tRNA thio-modification IEP Enrichment
BP GO:0042221 response to chemical IEP Enrichment
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043687 post-translational protein modification IEP Enrichment
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP Enrichment
BP GO:0061024 membrane organization IEP Enrichment
MF GO:0070567 cytidylyltransferase activity IEP Enrichment
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR013520 Exonuclease_RNaseT/DNA_pol3 23 197
No external refs found!