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  5. EDJ90499

EDJ90499 (CGSHi22421_06362)


Aliases : CGSHi22421_06362

Description : protein transport protein [Ensembl]. Type II secretion system (T2SS), Type II/IV secretion system protein [Interproscan].


Gene families : OG_02_0000073 (OrthoFinder) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ90499
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AAC73218 hofB, b0107 T2SE secretion family protein; P-loop ATPase superfamily... 0.04 OrthoFinder
AAC76351 gspE, b3326 general secretory pathway component, cryptic [Ensembl].... 0.03 OrthoFinder
AAL00666 spr1864, cglA Competence protein [Ensembl]. Type II/IV secretion... 0.05 OrthoFinder
AAL19107 STM0143, hofB putative integral membrane protein [Ensembl]. Type II... 0.02 OrthoFinder
AGT22638 N559_0849 twitching motility protein [Ensembl]. 0.03 OrthoFinder
AHY40650 CJ8421_07365 General secretory pathway protein E [Ensembl]. Type... 0.03 OrthoFinder
CCG26913 ComEA Late competence protein ComGA, access of DNA to ComEA... 0.05 OrthoFinder
CPC81008 comGA, ERS093114_01375 Late competence protein ComGA%2C access of DNA to ComEA... 0.04 OrthoFinder
CRN95468 epsE_2 Type II traffic warden ATPase [Ensembl]. Type II/IV... 0.03 OrthoFinder
CRP12828 xpsE_2 Type II traffic warden ATPase [Ensembl]. Type II... 0.06 OrthoFinder
KNA53343 VCV51_031632, PilB type IV-A pilus assembly ATPase PilB [Ensembl]. Type II... 0.1 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
BP GO:0006281 DNA repair IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006974 cellular response to DNA damage stimulus IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009292 genetic transfer IEP Enrichment
BP GO:0009294 DNA mediated transformation IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
MF GO:0019104 DNA N-glycosylase activity IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0033554 cellular response to stress IEP Enrichment
BP GO:0043647 inositol phosphate metabolic process IEP Enrichment
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
BP GO:0046164 alcohol catabolic process IEP Enrichment
BP GO:0046174 polyol catabolic process IEP Enrichment
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP Enrichment
BP GO:0046855 inositol phosphate dephosphorylation IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0051716 cellular response to stimulus IEP Enrichment
BP GO:0071545 inositol phosphate catabolic process IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
BP GO:1901616 organic hydroxy compound catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR007831 T2SS_GspE_N 29 95
IPR001482 T2SS/T4SS 129 395
No external refs found!