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  5. EDJ91266

EDJ91266 (CGSHi22421_02069)


Aliases : CGSHi22421_02069

Description : lipoyl synthase [Ensembl]. TRAM domain, Radical SAM superfamily, Uncharacterized protein family UPF0004 [Interproscan].


Gene families : OG_02_0000795 (OrthoFinder) Phylogenetic Tree(s): OG0000795_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91266
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AAC73762 miaB, b0661 tRNA-i(6)A37 methylthiotransferase [Ensembl]. TRAM... 0.08 OrthoFinder
AAL19621 STM0670, miaB methylthiolation of isopentenylated A37 derivatives in... 0.03 OrthoFinder
AGT25277 N559_3635, MiaB tRNA-I(6)A37 thiotransferase enzyme MiaB [Ensembl]. TRAM... 0.03 OrthoFinder
AKP15355 miaB, WX61_01307 (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB... 0.03 OrthoFinder
CBI66834 HPB8_1277 conserved hypothetical protein [Ensembl]. Radical SAM... 0.03 OrthoFinder
CRP36330 miaB (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB... 0.04 OrthoFinder
KNA56400 VCV51_030677, MiaB tRNA-I(6)A37 thiotransferase enzyme MiaB [Ensembl]. TRAM... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0035596 methylthiotransferase activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004312 fatty acid synthase activity IEP Enrichment
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006260 DNA replication IEP Enrichment
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008880 glucuronate isomerase activity IEP Enrichment
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Enrichment
CC GO:0009379 Holliday junction helicase complex IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
BP GO:0017013 protein flavinylation IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0032977 membrane insertase activity IEP Enrichment
CC GO:0033202 DNA helicase complex IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140104 molecular carrier activity IEP Enrichment
MF GO:0140597 protein carrier activity IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR007197 rSAM 151 325
IPR013848 Methylthiotransferase_N 4 104
IPR002792 TRAM_dom 378 440
No external refs found!