EDJ91333 (CGSHi22421_04498)

Aliases : CGSHi22421_04498

Description : 50S ribosomal protein L31 [Ensembl]. Ribosomal protein L31 [Interproscan].

Gene families : OG_02_0000170 (OrthoFinder) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: EDJ91333
Cluster	HCCA: Cluster_23

Target	Alias	Description	ECC score	Gene Family Method
AAC76918	rpmE, b3936	50S ribosomal subunit protein L31 [Ensembl]. Ribosomal...	0.14	OrthoFinder
AAK99980	spr1177, rpmE	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.04	OrthoFinder
AAL22936	STM4096, rpmE	50S ribosomal subunit protein L31 [Ensembl]. Ribosomal...	0.21	OrthoFinder
AEA93635	rpmE, OG1RF_10948	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
AKI50478	rpmE, L2625_02668	ribosomal protein L31 [Ensembl]. Ribosomal protein L31...	0.03	OrthoFinder
AKP15272	rpmE, WX61_01223	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.05	OrthoFinder
AKP16033	rpmE2, WX61_02006	50S ribosomal protein L31 type B [Ensembl]. Ribosomal...	0.03	OrthoFinder
CCG27118	No alias	LSU ribosomal protein L31p [Ensembl]. Ribosomal protein...	0.03	OrthoFinder
CCL19956	rpmE, BN171_3600034	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.04	OrthoFinder
CPD24869	rpmE2, ERS093114_02385	50S ribosomal protein L31 type B [Ensembl]. Ribosomal...	0.07	OrthoFinder
CRO57592	rpmE	50S ribosomal protein L31 [Ensembl]. Ribosomal protein...	0.09	OrthoFinder
KNA54898	VCV51_031796	ribosomal protein L31 [Ensembl]. Ribosomal protein L31...	0.06	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004455	ketol-acid reductoisomerase activity	IEP	Enrichment
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Enrichment
MF	GO:0008097	5S rRNA binding	IEP	Enrichment
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Enrichment
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Enrichment
MF	GO:0016763	pentosyltransferase activity	IEP	Enrichment
MF	GO:0019843	rRNA binding	IEP	Enrichment
CC	GO:0019867	outer membrane	IEP	Enrichment
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Enrichment
BP	GO:0042254	ribosome biogenesis	IEP	Enrichment
BP	GO:0043094	cellular metabolic compound salvage	IEP	Enrichment
BP	GO:0043174	nucleoside salvage	IEP	Enrichment
BP	GO:0044085	cellular component biogenesis	IEP	Enrichment
BP	GO:1990397	queuosine salvage	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002150	Ribosomal_L31	1	65

External Links

No external refs found!

EDJ91333 (CGSHi22421_04498)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation