EDJ91840 (CGSHi22421_08793)

Aliases : CGSHi22421_08793

Description : anaerobic dimethyl sulfoxide reductase chain B [Ensembl]. 4Fe-4S binding domain, 4Fe-4S dicluster domain [Interproscan].

Gene families : OG_02_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: EDJ91840
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AAC73981 dmsB, b0895 dimethyl sulfoxide reductase, anaerobic, subunit B... 0.05 OrthoFinder
AAC74661 ynfG, b1589 oxidoreductase, Fe-S subunit [Ensembl]. 4Fe-4S binding... 0.05 OrthoFinder
AAC74741 ydhX, b1671 putative 4Fe-4S ferridoxin-type protein; FNR, Nar,... 0.03 OrthoFinder
AAC74744 ydhY, b1674 putative 4Fe-4S ferridoxin-type protein; FNR, Nar,... 0.04 OrthoFinder
AAC76597 ysaA, b3573 putative hydrogenase, 4Fe-4S ferredoxin-type component... 0.03 OrthoFinder
AAC77042 nrfC, b4072 formate-dependent nitrite reductase, 4Fe4S subunit... 0.04 OrthoFinder
AAL19900 STM0965, dmsB anaerobic dimethyl sulfoxide reductase, subunit B... 0.03 OrthoFinder
AAL20416 STM1497 putative dimethyl sulphoxide reductase [Ensembl]. 4Fe-4S... 0.05 OrthoFinder
AAL20968 STM2064, phsB hydrogen sulfide production iron-sulfur subunit... 0.03 OrthoFinder
AAL21421 STM2527 putative polyferredoxin [Ensembl]. 4Fe-4S binding... 0.01 OrthoFinder
AAL21423 STM2529 putative anaerobic dimethylsulfoxide reductase... 0.03 OrthoFinder
AAL21723 STM2843, hydN electron transport protein (FeS center) from formate to... 0.03 OrthoFinder
AAL23103 STM4279, nrfC putative formate-dependent nitrite reductase [Ensembl].... 0.04 OrthoFinder
AAL23130 STM4306 putative anaerobic dimethyl sulfoxide reductase, subunit... 0.04 OrthoFinder
AGT24419 N559_2746 anaerobic dimethyl sulfoxide (DMSO) reductase, subunit B... 0.03 OrthoFinder
AGT25008 N559_3352 anaerobic dimethyl sulfoxide reductase subunit B... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
MF GO:0005451 monovalent cation:proton antiporter activity IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006835 dicarboxylic acid transport IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
MF GO:0015385 sodium:proton antiporter activity IEP Enrichment
MF GO:0015491 cation:cation antiporter activity IEP Enrichment
MF GO:0015556 C4-dicarboxylate transmembrane transporter activity IEP Enrichment
BP GO:0015740 C4-dicarboxylate transport IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019645 anaerobic electron transport chain IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
MF GO:0051139 metal ion:proton antiporter activity IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
InterPro domains Description Start Stop
IPR017896 4Fe4S_Fe-S-bd 60 152
IPR017896 4Fe4S_Fe-S-bd 10 24
No external refs found!