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  5. EDJ91874

EDJ91874 (CGSHi22421_08963)


Aliases : CGSHi22421_08963

Description : ABC-type amino acid transport system permease component [Ensembl]. Binding-protein-dependent transport system inner membrane component [Interproscan].


Gene families : OG_02_0000016 (OrthoFinder) Phylogenetic Tree(s): OG0000016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: EDJ91874
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC73754 gltK, b0653 glutamate/aspartate ABC transporter permease [Ensembl].... 0.01 OrthoFinder
AAC73949 artQ, b0862 arginine ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAC74985 tcyL, b1918 ABC family putative inner membrane permease [Ensembl].... 0.07 OrthoFinder
AAK99213 spr0409, glnH ABC transporter substrate binding protein-glutamine... 0.03 OrthoFinder
AAK99531 spr0727, glnP ABC transporter membrane-spanning permease-glutamine... 0.04 OrthoFinder
AAL19614 STM0663, gltK glutamate/aspartate transporter [Ensembl].... 0.03 OrthoFinder
AAL19765 STM0829, glnP glutamine high-affinity transporter [Ensembl].... 0.04 OrthoFinder
AAL19824 STM0889, artQ arginine 3rd transport system [Ensembl].... 0.03 OrthoFinder
AEA92878 OG1RF_10191 amino acid ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AEA93226 OG1RF_10539 amino acid ABC superfamily ATP binding cassette... 0.03 OrthoFinder
AGT25038 N559_3385, ArtQ arginine transporter permease subunit ArtQ [Ensembl].... 0.03 OrthoFinder
AGT25284 N559_3642 glutamate/aspartate ABC superfamily ATP binding cassette... 0.05 OrthoFinder
AGT25743 N559_4117 glutamate/aspartate transport system inner membrane... 0.03 OrthoFinder
CCG27184 No alias Cysteine ABC transporter, permease protein [Ensembl].... 0.03 OrthoFinder
CCL16928 BN171_1000002 ABC-type transport system, aminoacid-family permease... 0.03 OrthoFinder
CCL18563 BN171_2440004 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CCL18564 BN171_2440005 ABC-type transport system,cystine/aminoacid-family... 0.03 OrthoFinder
CPD19910 tcyB, ERS093114_02272 cystine transport system permease protein [Ensembl].... 0.04 OrthoFinder
CRP60552 yecS_3 Inner membrane amino-acid ABC transporter permease... 0.03 OrthoFinder
CRP60578 yecS_4 Inner membrane amino-acid ABC transporter permease... 0.03 OrthoFinder
KNA53744 VCV51_033270 His/Glu/Gln/Arg/opine family amino ABC transporter... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005887 integral component of plasma membrane IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
CC GO:0031226 intrinsic component of plasma membrane IEP Enrichment
MF GO:0034257 nicotinamide riboside transmembrane transporter activity IEP Enrichment
BP GO:0034258 nicotinamide riboside transport IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000515 MetI-like 48 235
No external refs found!