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Aliases : CGSHi22421_09048
Description : cytochrome C-type biogenesis protein [Ensembl]. Cytochrome C biogenesis protein [Interproscan].
Gene families : OG_02_0000892 (OrthoFinder) Phylogenetic Tree(s): OG0000892_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: EDJ91891 | |
| Cluster | HCCA: Cluster_4 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC75254 | ccmH, b2194 | heme lyase, CcmH subunit [Ensembl]. Cytochrome C... | 0.04 | OrthoFinder | |
| AAL21149 | STM2247, ccmH | putative heme lyase subunit [Ensembl]. Cytochrome C... | 0.05 | OrthoFinder | |
| AGT23929 | N559_2217 | putative subunit of heme lyase [Ensembl].... | 0.06 | OrthoFinder | |
| AGT23930 | N559_2218 | subunit of heme lyase [Ensembl]. | 0.06 | OrthoFinder | |
| CRP40950 | ccmH | Cytochrome c-type biogenesis protein CcmH precursor... | 0.02 | OrthoFinder | |
| KNA59636 | VCV51_032536 | cytochrome C biogenesis protein [Ensembl]. Cytochrome C... | 0.03 | OrthoFinder | |
| KNA59637 | VCV51_031375, CcmI | cytochrome c-type biogenesis protein CcmI [Ensembl]. | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Enrichment |
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0003918 | DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity | IEP | Enrichment |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Enrichment |
| MF | GO:0004359 | glutaminase activity | IEP | Enrichment |
| MF | GO:0004813 | alanine-tRNA ligase activity | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006269 | DNA replication, synthesis of RNA primer | IEP | Enrichment |
| BP | GO:0006419 | alanyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006541 | glutamine metabolic process | IEP | Enrichment |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Enrichment |
| BP | GO:0006826 | iron ion transport | IEP | Enrichment |
| MF | GO:0008144 | drug binding | IEP | Enrichment |
| MF | GO:0008658 | penicillin binding | IEP | Enrichment |
| MF | GO:0015232 | heme transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0015886 | heme transport | IEP | Enrichment |
| CC | GO:0016020 | membrane | IEP | Enrichment |
| BP | GO:0016043 | cellular component organization | IEP | Enrichment |
| BP | GO:0017003 | protein-heme linkage | IEP | Enrichment |
| BP | GO:0017004 | cytochrome complex assembly | IEP | Enrichment |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Enrichment |
| MF | GO:0020037 | heme binding | IEP | Enrichment |
| BP | GO:0022607 | cellular component assembly | IEP | Enrichment |
| BP | GO:0030258 | lipid modification | IEP | Enrichment |
| BP | GO:0030259 | lipid glycosylation | IEP | Enrichment |
| MF | GO:0031406 | carboxylic acid binding | IEP | Enrichment |
| MF | GO:0033218 | amide binding | IEP | Enrichment |
| MF | GO:0033293 | monocarboxylic acid binding | IEP | Enrichment |
| BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Enrichment |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Enrichment |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Enrichment |
| BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Enrichment |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0043165 | Gram-negative-bacterium-type cell outer membrane assembly | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| MF | GO:0043177 | organic acid binding | IEP | Enrichment |
| BP | GO:0043933 | protein-containing complex subunit organization | IEP | Enrichment |
| BP | GO:0046184 | aldehyde biosynthetic process | IEP | Enrichment |
| MF | GO:0046906 | tetrapyrrole binding | IEP | Enrichment |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| BP | GO:0071709 | membrane assembly | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Enrichment |
| BP | GO:1901678 | iron coordination entity transport | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005616 | CcmH/CycL/Ccl2/NrfF | 8 | 149 |
| No external refs found! |