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Aliases : rpmC, HPB8_168
Description : large subunit ribosomal protein L2 [Ensembl]. Ribosomal L29 protein [Interproscan].
Gene families : OG_02_0000484 (OrthoFinder) Phylogenetic Tree(s): OG0000484_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: CBI65725 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AAC76337 | rpmC, b3312 | 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... | 0.03 | OrthoFinder | |
| AAL22295 | STM3432, rpmC | 50S ribosomal subunit protein L29 [Ensembl]. Ribosomal... | 0.03 | OrthoFinder | |
| CCL20571 | rpmC, BN171_70011 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.03 | OrthoFinder | |
| CCP43453 | rpmC, Rv0709 | 50S ribosomal protein L29 RpmC [Ensembl]. Ribosomal L29... | 0.03 | OrthoFinder | |
| CPD13781 | rpmC, ERS093114_02130 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.04 | OrthoFinder | |
| CRO73990 | rpmC | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.03 | OrthoFinder | |
| EDJ91362 | CGSHi22421_04643 | 50S ribosomal protein L29 [Ensembl]. Ribosomal L29... | 0.03 | OrthoFinder | |
| KNA54980 | VCV51_033163 | ribosomal L29 protein [Ensembl]. Ribosomal L29 protein... | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003743 | translation initiation factor activity | IEP | Enrichment |
| MF | GO:0004620 | phospholipase activity | IEP | Enrichment |
| MF | GO:0004814 | arginine-tRNA ligase activity | IEP | Enrichment |
| BP | GO:0006412 | translation | IEP | Enrichment |
| BP | GO:0006420 | arginyl-tRNA aminoacylation | IEP | Enrichment |
| BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
| BP | GO:0006486 | protein glycosylation | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| MF | GO:0008417 | fucosyltransferase activity | IEP | Enrichment |
| MF | GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity | IEP | Enrichment |
| MF | GO:0008961 | phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016298 | lipase activity | IEP | Enrichment |
| MF | GO:0016757 | glycosyltransferase activity | IEP | Enrichment |
| MF | GO:0016758 | hexosyltransferase activity | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| BP | GO:0036211 | protein modification process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
| BP | GO:0043413 | macromolecule glycosylation | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
| BP | GO:0070085 | glycosylation | IEP | Enrichment |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001854 | Ribosomal_L29/L35 | 5 | 58 |
| UniProtKB | D7FC18 |