Aliases : rpoA, HPB8_186
Description : DNA-directed RNA polymerase subunit alpha [Ensembl]. Bacterial RNA polymerase, RNA polymerase Rpb3/RpoA insert domain, RNA polymerase Rpb3/Rpb11 dimerisation domain [Interproscan].
Gene families : OG_02_0000391 (OrthoFinder) Phylogenetic Tree(s): OG0000391_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: CBI65743 | |
Cluster | HCCA: Cluster_9 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAC76320 | rpoA, b3295 | RNA polymerase, alpha subunit [Ensembl]. Bacterial RNA... | 0.16 | OrthoFinder | |
AAK99019 | spr0215, rpoA | RNA polymerase alpha subunit [Ensembl]. Bacterial RNA... | 0.16 | OrthoFinder | |
AAL22278 | STM3415, rpoA | RNA polymerase, alpha subunit [Ensembl]. Bacterial RNA... | 0.16 | OrthoFinder | |
ADK86748 | rpoA, MPNE_0220 | DNA-directed RNA polymerase, alpha subunit [Ensembl].... | 0.08 | OrthoFinder | |
AEA92864 | rpoA, OG1RF_10177 | DNA-directed RNA polymerase subunit alpha [Ensembl].... | 0.12 | OrthoFinder | |
AGT22265 | N559_0457 | DNA-directed RNA polymerase subunit alpha [Ensembl]. RNA... | 0.1 | OrthoFinder | |
AHY40768 | CJ8421_07980 | DNA-directed RNA polymerase subunit alpha [Ensembl].... | 0.13 | OrthoFinder | |
AKI50541 | rpoA, L2625_02751 | DNA-directed RNA polymerase, alpha subunit [Ensembl].... | 0.13 | OrthoFinder | |
AKP15146 | rpoA, WX61_01092 | DNA-directed RNA polymerase subunit alpha [Ensembl].... | 0.07 | OrthoFinder | |
CCG27405 | No alias | DNA-directed RNA polymerase alpha subunit [Ensembl].... | 0.09 | OrthoFinder | |
CCL20591 | rpoA, BN171_70031 | DNA-directed RNA polymerase subunit alpha [Ensembl]. RNA... | 0.11 | OrthoFinder | |
CCP46279 | rpoA, Rv3457c | Probable DNA-directed RNA polymerase (alpha chain) RpoA... | 0.1 | OrthoFinder | |
CPD14384 | rpoA, ERS093114_02148 | DNA-directed RNA polymerase alpha subunit [Ensembl].... | 0.18 | OrthoFinder | |
CRO74499 | rpoA | DNA-directed RNA polymerase subunit alpha [Ensembl].... | 0.18 | OrthoFinder | |
EDJ91381 | CGSHi22421_04738 | DNA-directed RNA polymerase subunit alpha [Ensembl].... | 0.14 | OrthoFinder | |
KNA54997 | VCV51_033180 | DNA-directed RNA polymerase [Ensembl]. Bacterial RNA... | 0.12 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEA | Interproscan |
BP | GO:0006351 | transcription, DNA-templated | IEA | Interproscan |
MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
MF | GO:0003735 | structural constituent of ribosome | IEP | Enrichment |
MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Enrichment |
MF | GO:0003924 | GTPase activity | IEP | Enrichment |
MF | GO:0003989 | acetyl-CoA carboxylase activity | IEP | Enrichment |
MF | GO:0005198 | structural molecule activity | IEP | Enrichment |
CC | GO:0005575 | cellular_component | IEP | Enrichment |
CC | GO:0005840 | ribosome | IEP | Enrichment |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Enrichment |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Enrichment |
BP | GO:0006412 | translation | IEP | Enrichment |
BP | GO:0006518 | peptide metabolic process | IEP | Enrichment |
MF | GO:0016421 | CoA carboxylase activity | IEP | Enrichment |
MF | GO:0016874 | ligase activity | IEP | Enrichment |
MF | GO:0016885 | ligase activity, forming carbon-carbon bonds | IEP | Enrichment |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
BP | GO:0030258 | lipid modification | IEP | Enrichment |
BP | GO:0030259 | lipid glycosylation | IEP | Enrichment |
CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Enrichment |
BP | GO:0034220 | ion transmembrane transport | IEP | Enrichment |
BP | GO:0043038 | amino acid activation | IEP | Enrichment |
BP | GO:0043039 | tRNA aminoacylation | IEP | Enrichment |
BP | GO:0043043 | peptide biosynthetic process | IEP | Enrichment |
MF | GO:0043167 | ion binding | IEP | Enrichment |
MF | GO:0043168 | anion binding | IEP | Enrichment |
CC | GO:0043226 | organelle | IEP | Enrichment |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
BP | GO:0043603 | cellular amide metabolic process | IEP | Enrichment |
BP | GO:0043604 | amide biosynthetic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0044281 | small molecule metabolic process | IEP | Enrichment |
CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Enrichment |
BP | GO:0046034 | ATP metabolic process | IEP | Enrichment |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Enrichment |
BP | GO:0098655 | cation transmembrane transport | IEP | Enrichment |
BP | GO:0098660 | inorganic ion transmembrane transport | IEP | Enrichment |
BP | GO:0098662 | inorganic cation transmembrane transport | IEP | Enrichment |
CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Enrichment |
BP | GO:1902600 | proton transmembrane transport | IEP | Enrichment |
UniProtKB | D7FC36 |