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  5. AHY40765

AHY40765 (rpsM, CJ8421_07965)


Aliases : rpsM, CJ8421_07965

Description : 30S ribosomal protein S13 [Ensembl]. Ribosomal protein S13/S18 [Interproscan].


Gene families : OG_02_0000825 (OrthoFinder) Phylogenetic Tree(s): OG0000825_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AHY40765
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAK99017 spr0213, rpsM 30S Ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
ADK86745 rpsM, MPNE_0218 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.03 OrthoFinder
AEA92862 rpsM, OG1RF_10175 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.22 OrthoFinder
AKI50543 rpsM, L2625_02753 ribosomal protein S13 [Ensembl]. Ribosomal protein S13... 0.22 OrthoFinder
AKP15144 rpsM, WX61_01090 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.09 OrthoFinder
CBI65740 rpsM, HPB8_183 small subunit ribosomal protein S13 [Ensembl]. Ribosomal... 0.14 OrthoFinder
CCG27403 No alias SSU ribosomal protein S13p (S18e) [Ensembl]. Ribosomal... 0.07 OrthoFinder
CCL20588 rpsM, BN171_70028 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.23 OrthoFinder
CCP46282 rpsM, Rv3460c 30S ribosomal protein S13 RpsM [Ensembl]. Ribosomal... 0.18 OrthoFinder
CPD14335 rpsM, ERS093114_02146 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.29 OrthoFinder
CRO74398 rpsM 30S ribosomal protein S13 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003852 2-isopropylmalate synthase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004478 methionine adenosyltransferase activity IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006551 leucine metabolic process IEP Enrichment
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009098 leucine biosynthetic process IEP Enrichment
BP GO:0009143 nucleoside triphosphate catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
BP GO:0018130 heterocycle biosynthetic process IEP Enrichment
BP GO:0019438 aromatic compound biosynthetic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0032774 RNA biosynthetic process IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0046500 S-adenosylmethionine metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
BP GO:1901362 organic cyclic compound biosynthetic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 3 109
No external refs found!