AGT21929 (N559_0103, EefC)

Aliases : N559_0103, EefC

Description : multidrug efflux transport outer membrane protein EefC [Ensembl].

Gene families : OG_02_0000126 (OrthoFinder) Phylogenetic Tree(s): OG0000126_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: AGT21929
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAD13463 mdtP, b4080 outer membrane factor of efflux pump [Ensembl]. Outer... 0.03 OrthoFinder
AGT23425 N559_1681, MdtQ multidrug resistance outer membrane protein MdtQ [Ensembl]. 0.03 OrthoFinder
AGT26874 N559_5300, CusC Cation efflux system protein CusC [Ensembl]. 0.04 OrthoFinder
AKP14427 oprM, WX61_00345 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.02 OrthoFinder
CRO88249 oprM_3 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.02 OrthoFinder
CRP22942 oprM_4 Outer membrane protein OprM precursor [Ensembl]. Outer... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0015562 efflux transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008374 O-acyltransferase activity IEP Enrichment
MF GO:0008811 chloramphenicol O-acetyltransferase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016413 O-acetyltransferase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
InterPro domains Description Start Stop
IPR003423 OMP_efflux 271 437
IPR003423 OMP_efflux 58 240
No external refs found!