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  5. AGT21931

AGT21931 (N559_0105)


Aliases : N559_0105

Description : EefA [Ensembl]. Barrel-sandwich domain of CusB or HlyD membrane-fusion [InterProScan].


Gene families : OG_02_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT21931
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73565 acrA, b0463 multidrug efflux system [Ensembl]. HlyD membrane-fusion... 0.04 OrthoFinder
AAL19306 STM0352 putative cation efflux pump [Ensembl]. Barrel-sandwich... 0.04 OrthoFinder
AAL22259 STM3390, acrE transmembrane protein affecting septum formation and... 0.07 OrthoFinder
AGT25400 N559_3764, HlyD putative secretion protein HlyD [Ensembl].... 0.04 OrthoFinder
CRO88312 mexA_1 Multidrug resistance protein MexA precursor [Ensembl].... 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008671 2-dehydro-3-deoxygalactonokinase activity IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009297 pilus assembly IEP Enrichment
MF GO:0015105 arsenite transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015288 porin activity IEP Enrichment
MF GO:0015473 fimbrial usher porin activity IEP Enrichment
BP GO:0015700 arsenite transport IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019520 aldonic acid metabolic process IEP Enrichment
BP GO:0019583 galactonate metabolic process IEP Enrichment
BP GO:0019584 galactonate catabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0022829 wide pore channel activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
BP GO:0034192 D-galactonate metabolic process IEP Enrichment
BP GO:0034194 D-galactonate catabolic process IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0043711 pilus organization IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
BP GO:0046176 aldonic acid catabolic process IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR006143 RND_pump_MFP 205 271
IPR032317 HlyD_D23 2 204
No external refs found!