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  5. AGT21952

AGT21952 (N559_0126)


Aliases : N559_0126

Description : putative transporter [Ensembl].


Gene families : OG_02_0000980 (OrthoFinder) Phylogenetic Tree(s): OG0000980_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT21952
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAC73373 yagG, b0270 CP4-6 prophage; putative sugar transporter [Ensembl].... 0.03 OrthoFinder
AAC76681 yicJ, b3657 putative transporter [Ensembl]. MFS/sugar transport... 0.05 OrthoFinder
AAL19006 STM0042 putative sodium galactoside symporter [Ensembl].... 0.05 OrthoFinder
AAL19113 STM0149 putative permease of the Na+:galactoside symporter... 0.04 OrthoFinder
AAL22609 STM3750, yicJ putative GPH family transport protein [Ensembl].... 0.03 OrthoFinder
AGT23602 N559_1869 putative oligogalacturonide transporter [Ensembl]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008643 carbohydrate transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
CC GO:0030288 outer membrane-bounded periplasmic space IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
BP GO:0045229 external encapsulating structure organization IEP Enrichment
BP GO:0046434 organophosphate catabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071554 cell wall organization or biogenesis IEP Enrichment
BP GO:0071555 cell wall organization IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment

No InterPro domains available for this sequence

No external refs found!