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  5. AGT21993

AGT21993 (N559_0170)


Aliases : N559_0170

Description : 50S ribosomal protein L28 [Ensembl].


Gene families : OG_02_0000360 (OrthoFinder) Phylogenetic Tree(s): OG0000360_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT21993
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76661 rpmB, b3637 50S ribosomal subunit protein L28 [Ensembl]. Ribosomal... 0.07 OrthoFinder
AAL22587 STM3728, rpmB 50S ribosomal subunit protein L28 [Ensembl]. Ribosomal... 0.06 OrthoFinder
AEA95067 rpmB2, OG1RF_12380 50S ribosomal protein L28 [Ensembl]. Ribosomal L28... 0.02 OrthoFinder
CCL19022 rpmB, BN171_2800001 50S ribosomal protein L28 [Ensembl]. Ribosomal L28... 0.04 OrthoFinder
CRO28155 rpmB 50S ribosomal protein L28 [Ensembl]. Ribosomal L28... 0.04 OrthoFinder
KNA52491 VCV51_030149 ribosomal protein L28 [Ensembl]. Ribosomal L28 family... 0.06 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003796 lysozyme activity IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
MF GO:0015097 mercury ion transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
BP GO:0015694 mercury ion transport IEP Enrichment
BP GO:0016998 cell wall macromolecule catabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044036 cell wall macromolecule metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!