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  5. AGT22039

AGT22039 (N559_0217)


Aliases : N559_0217

Description : D-xylose transport permease ABC transporter membrane protein [Ensembl].


Gene families : OG_02_0000052 (OrthoFinder) Phylogenetic Tree(s): OG0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22039
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AAC74588 lsrD, b1515 autoinducer 2 import system permease protein [Ensembl].... 0.03 OrthoFinder
AAC75209 mglC, b2148 methyl-galactoside transporter subunit [Ensembl].... 0.07 OrthoFinder
AAC75599 yphD, b2546 putative sugar ABC transporter permease [Ensembl].... 0.05 OrthoFinder
AAC76592 xylH, b3568 D-xylose ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC76773 rbsC, b3750 D-ribose ABC transporter permease [Ensembl].... 0.02 OrthoFinder
AAC77047 alsC, b4086 D-allose ABC transporter permease [Ensembl].... 0.03 OrthoFinder
AAL21092 STM2188, mglC methyl-galactoside transport protein [Ensembl].... 0.06 OrthoFinder
AAL22741 STM3883, rbsC D-ribose high-affinity transport protein (1st module,... 0.03 OrthoFinder
AGT26697 N559_5123 ribose ABC transporter permease protein [Ensembl]. 0.03 OrthoFinder
CRN86499 rbsC Ribose transport system permease protein RbsC [Ensembl].... 0.03 OrthoFinder
EDJ91405 CGSHi22421_04858 beta-methylgalactoside transporter inner membrane... 0.04 OrthoFinder
KNA60662 VCV51_032101 branched-chain amino acid transport system/permease... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003951 NAD+ kinase activity IEP Enrichment
BP GO:0006739 NADP metabolic process IEP Enrichment
BP GO:0006741 NADP biosynthetic process IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
InterPro domains Description Start Stop
IPR001851 ABC_transp_permease 56 383
No external refs found!