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AGT22054 (N559_0232)


Aliases : N559_0232

Description : putative transcriptional regulator [Ensembl]. Cro/C1-type helix-turn-helix domain [InterProScan].


Gene families : OG_02_0003653 (OrthoFinder) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22054
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AAC76579 yiaG, b3555 HTH_CROC1 family putative transcriptional regulator... 0.1 OrthoFinder
AAL22508 STM3648, yiaG putative transcriptional regulator [Ensembl]. 0.11 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000746 conjugation IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0009268 response to pH IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0010447 response to acidic pH IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043022 ribosome binding IEP Enrichment
BP GO:0044764 multi-organism cellular process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0051704 multi-organism process IEP Enrichment
BP GO:0071214 cellular response to abiotic stimulus IEP Enrichment
BP GO:0071467 cellular response to pH IEP Enrichment
BP GO:0071468 cellular response to acidic pH IEP Enrichment
BP GO:0104004 cellular response to environmental stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR001387 Cro/C1-type_HTH 39 80
No external refs found!