AGT22224 (N559_0411)

Aliases : N559_0411

Description : cAMP-regulatory protein [Ensembl]. Cyclic nucleotide-binding domain, Crp-like helix-turn-helix domain, Crp-type HTH domain [InterProScan].

Gene families : OG_02_0000362 (OrthoFinder) Phylogenetic Tree(s): OG0000362_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT22224
Cluster	HCCA: Cluster_19

Target	Alias	Description	ECC score	Gene Family Method
AAL22328	STM3466, crp	catabolite activator protein (CAP) [Ensembl]. Crp-like...	0.1	OrthoFinder
AEA94291	OG1RF_11604	cyclic AMP receptor protein [Ensembl]. Crp-like...	0.03	OrthoFinder
CCG27446	ArcR	Transcriptional regulator ArcR essential for anaerobic...	0.04	OrthoFinder
EDJ91383	CGSHi22421_04748	predicted cAMP-binding protein-catabolite gene activator...	0.04	OrthoFinder
EDJ91757	CGSHi22421_08378	cAMP-regulatory protein [Ensembl]. Crp-like...	0.03	OrthoFinder
KNA54958	VCV51_031750	cyclic nucleotide-binding domain-containing protein...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003855	3-dehydroquinate dehydratase activity	IEP	Enrichment
MF	GO:0004743	pyruvate kinase activity	IEP	Enrichment
MF	GO:0005534	galactose binding	IEP	Enrichment
BP	GO:0005975	carbohydrate metabolic process	IEP	Enrichment
BP	GO:0006012	galactose metabolic process	IEP	Enrichment
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Enrichment
BP	GO:0006835	dicarboxylic acid transport	IEP	Enrichment
MF	GO:0008108	UDP-glucose:hexose-1-phosphate uridylyltransferase activity	IEP	Enrichment
BP	GO:0010564	regulation of cell cycle process	IEP	Enrichment
MF	GO:0015556	C4-dicarboxylate transmembrane transporter activity	IEP	Enrichment
BP	GO:0015740	C4-dicarboxylate transport	IEP	Enrichment
MF	GO:0030955	potassium ion binding	IEP	Enrichment
MF	GO:0031420	alkali metal ion binding	IEP	Enrichment
BP	GO:0032954	regulation of cytokinetic process	IEP	Enrichment
BP	GO:0032955	regulation of division septum assembly	IEP	Enrichment
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Enrichment
MF	GO:0048029	monosaccharide binding	IEP	Enrichment
BP	GO:0051128	regulation of cellular component organization	IEP	Enrichment
BP	GO:0051726	regulation of cell cycle	IEP	Enrichment
MF	GO:0070569	uridylyltransferase activity	IEP	Enrichment
BP	GO:1901891	regulation of cell septum assembly	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	23	109
IPR012318	HTH_CRP	142	206

External Links

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AGT22224 (N559_0411)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation