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  5. AGT22238

AGT22238 (N559_0427)


Aliases : N559_0427

Description : 30S ribosomal protein S7 [Ensembl]. Ribosomal protein S7 domain [InterProScan].


Gene families : OG_02_0000365 (OrthoFinder) Phylogenetic Tree(s): OG0000365_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22238
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AAC76366 rpsG, b3341 30S ribosomal subunit protein S7 [Ensembl]. Ribosomal... 0.22 OrthoFinder
AAK99053 spr0249, rpsG 30S Ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.12 OrthoFinder
AAL22310 STM3447, rpsG 30S ribosomal subunit protein S7 [Ensembl]. Ribosomal... 0.23 OrthoFinder
ADK87185 rpsG, MPNE_0258 ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
AEA92832 rpsG, OG1RF_10145 30S ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
AHY39734 CJ8421_02405 30S ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
AKI50590 rpsG, L2625_02800 ribosomal protein S7 [Ensembl]. Ribosomal protein S7... 0.16 OrthoFinder
AKP15119 rpsG, WX61_01065 30S ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CBI65852 rpsG, HPB8_295 small subunit ribosomal protein S7 [Ensembl]. Ribosomal... 0.08 OrthoFinder
CCG26289 No alias SSU ribosomal protein S7p (S5e) [Ensembl]. Ribosomal... 0.12 OrthoFinder
CCL20679 rpsG, BN171_90005 30S ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.17 OrthoFinder
CCP43426 rpsG, Rv0683 30S ribosomal protein S7 RpsG [Ensembl]. Ribosomal... 0.06 OrthoFinder
CPC57115 rpsG, ERS093114_00832 30S ribosomalprotein S7p (S5e) [Ensembl]. Ribosomal... 0.21 OrthoFinder
CRO73636 rpsG 30S ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.19 OrthoFinder
EDJ90053 CGSHi22421_05930 30S ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.15 OrthoFinder
KNA49089 VCV51_033818 ribosomal protein S7 [Ensembl]. Ribosomal protein... 0.14 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006304 DNA modification IEP Enrichment
BP GO:0006305 DNA alkylation IEP Enrichment
BP GO:0006306 DNA methylation IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
MF GO:0009007 site-specific DNA-methyltransferase (adenine-specific) activity IEP Enrichment
MF GO:0009008 DNA-methyltransferase activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0032775 DNA methylation on adenine IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043414 macromolecule methylation IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
BP GO:0044728 DNA methylation or demethylation IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 1 149
No external refs found!