AGT22253 (N559_0445)


Aliases : N559_0445

Description : 50S ribosomal protein L24 [Ensembl].


Gene families : OG_02_0000398 (OrthoFinder) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22253
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AAK99004 spr0200, rplX 50S Ribosomal protein L24 [Ensembl]. KOW motif,... 0.07 OrthoFinder
AAL22292 STM3429, rplX 50S ribosomal subunit protein L24 [Ensembl]. KOW motif,... 0.12 OrthoFinder
ADK86742 rplX, MPNE_0205 ribosomal protein L24 [Ensembl]. KOW motif, Ribosomal... 0.04 OrthoFinder
AEA92849 rplX, OG1RF_10162 50S ribosomal protein L24 [Ensembl]. KOW motif,... 0.13 OrthoFinder
AKI50556 rplX, L2625_02766 ribosomal protein L24 [Ensembl]. Ribosomal protein L24,... 0.09 OrthoFinder
AKP15134 rplX, WX61_01080 50S ribosomal protein L24 [Ensembl]. KOW motif,... 0.06 OrthoFinder
CCG27390 No alias LSU ribosomal protein L24p (L26e) [Ensembl]. KOW motif,... 0.04 OrthoFinder
CCL20574 rplX, BN171_70014 50S ribosomal protein L24 [Ensembl]. KOW motif,... 0.1 OrthoFinder
CCP43459 rplX, Rv0715 50S ribosomal protein L24 RplX [Ensembl]. KOW motif,... 0.09 OrthoFinder
CPD13887 rplX, ERS093114_02133 50S ribosomal protein L24 [Ensembl]. KOW motif,... 0.1 OrthoFinder
CRO74072 rplX 50S ribosomal protein L24 [Ensembl]. KOW motif,... 0.11 OrthoFinder
EDJ91367 rplN, CGSHi22421_04668 50S ribosomal protein L14 [Ensembl]. KOW motif,... 0.12 OrthoFinder
KNA54983 VCV51_033166 ribosomal protein L24 [Ensembl]. KOW motif, Ribosomal... 0.11 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004852 uroporphyrinogen-III synthase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006364 rRNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016072 rRNA metabolic process IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0019627 urea metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043419 urea catabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0043605 cellular amide catabolic process IEP Enrichment
BP GO:0044270 cellular nitrogen compound catabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:0071941 nitrogen cycle metabolic process IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:0140101 catalytic activity, acting on a tRNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR005824 KOW 8 37
IPR003256 Ribosomal_L24 39 103
No external refs found!