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  5. AGT22266

AGT22266 (N559_0458)


Aliases : N559_0458

Description : 50S ribosomal protein L17 [Ensembl].


Gene families : OG_02_0000479 (OrthoFinder) Phylogenetic Tree(s): OG0000479_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22266
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AAC76319 rplQ, b3294 50S ribosomal subunit protein L17 [Ensembl]. Ribosomal... 0.08 OrthoFinder
AAK99020 spr0216, rplQ 50S Ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AAL22277 STM3414, rplQ 50S ribosomal subunit protein L17 [Ensembl]. Ribosomal... 0.11 OrthoFinder
AEA92865 rplQ, OG1RF_10178 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
AHY40769 rplQ, CJ8421_07985 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
AKI50540 rplQ, L2625_02750 ribosomal protein L17 [Ensembl]. Ribosomal protein L17... 0.07 OrthoFinder
CBI65744 rplQ, HPB8_187 large subunit ribosomal protein L17 [Ensembl]. Ribosomal... 0.04 OrthoFinder
CCG27406 No alias LSU ribosomal protein L17p [Ensembl]. Ribosomal protein... 0.05 OrthoFinder
CCL20592 rplQ, BN171_70032 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
CCP46278 rplQ, Rv3456c 50S ribosomal protein L17 RplQ [Ensembl]. Ribosomal... 0.06 OrthoFinder
CPD14418 rplQ, ERS093114_02149 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.06 OrthoFinder
CRO74536 rplQ 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
EDJ91382 CGSHi22421_04743 50S ribosomal protein L17 [Ensembl]. Ribosomal protein... 0.1 OrthoFinder
KNA54998 VCV51_033181 ribosomal protein L17 [Ensembl]. Ribosomal protein L17... 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Enrichment
MF GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000456 Ribosomal_L17 20 116
No external refs found!