Aliases : N559_0518
Description : putative DNA-binding transcriptional regulator [Ensembl]. LysR substrate binding domain, lysR family [InterProScan].
Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AGT22322 | |
Cluster | HCCA: Cluster_46 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AAL20594 | STM1677 | putative LysR family transcriptional regulator... | 0.04 | OrthoFinder | |
AAL22236 | STM3367, yhcS | putative LysR family transcriptional regulator... | 0.04 | OrthoFinder | |
CRO10861 | dmlR_7 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.02 | OrthoFinder | |
CRP22590 | dmlR_24 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.04 | OrthoFinder | |
CRP22917 | dmlR_25 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.04 | OrthoFinder | |
CRP68785 | dmlR_33 | D-malate degradation protein R [Ensembl]. LysR substrate... | 0.04 | OrthoFinder | |
KNA59858 | VCV51_032269 | LysR substrate binding domain-containing protein... | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Enrichment |
BP | GO:0006553 | lysine metabolic process | IEP | Enrichment |
MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Enrichment |
BP | GO:0008645 | hexose transmembrane transport | IEP | Enrichment |
MF | GO:0008837 | diaminopimelate epimerase activity | IEP | Enrichment |
BP | GO:0009085 | lysine biosynthetic process | IEP | Enrichment |
BP | GO:0009089 | lysine biosynthetic process via diaminopimelate | IEP | Enrichment |
MF | GO:0015099 | nickel cation transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015145 | monosaccharide transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015149 | hexose transmembrane transporter activity | IEP | Enrichment |
MF | GO:0015153 | rhamnose transmembrane transporter activity | IEP | Enrichment |
BP | GO:0015675 | nickel cation transport | IEP | Enrichment |
BP | GO:0015749 | monosaccharide transmembrane transport | IEP | Enrichment |
CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
MF | GO:0016746 | acyltransferase activity | IEP | Enrichment |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Enrichment |
MF | GO:0016855 | racemase and epimerase activity, acting on amino acids and derivatives | IEP | Enrichment |
CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
BP | GO:0035444 | nickel cation transmembrane transport | IEP | Enrichment |
MF | GO:0036361 | racemase activity, acting on amino acids and derivatives | IEP | Enrichment |
BP | GO:0046451 | diaminopimelate metabolic process | IEP | Enrichment |
MF | GO:0047661 | amino-acid racemase activity | IEP | Enrichment |
MF | GO:0051119 | sugar transmembrane transporter activity | IEP | Enrichment |
No external refs found! |