AGT22322 (N559_0518)


Aliases : N559_0518

Description : putative DNA-binding transcriptional regulator [Ensembl]. LysR substrate binding domain, lysR family [InterProScan].


Gene families : OG_02_0000007 (OrthoFinder) Phylogenetic Tree(s): OG0000007_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22322
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AAL20594 STM1677 putative LysR family transcriptional regulator... 0.04 OrthoFinder
AAL22236 STM3367, yhcS putative LysR family transcriptional regulator... 0.04 OrthoFinder
CRO10861 dmlR_7 D-malate degradation protein R [Ensembl]. LysR substrate... 0.02 OrthoFinder
CRP22590 dmlR_24 D-malate degradation protein R [Ensembl]. LysR substrate... 0.04 OrthoFinder
CRP22917 dmlR_25 D-malate degradation protein R [Ensembl]. LysR substrate... 0.04 OrthoFinder
CRP68785 dmlR_33 D-malate degradation protein R [Ensembl]. LysR substrate... 0.04 OrthoFinder
KNA59858 VCV51_032269 LysR substrate binding domain-containing protein... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008081 phosphoric diester hydrolase activity IEP Enrichment
BP GO:0008645 hexose transmembrane transport IEP Enrichment
MF GO:0008837 diaminopimelate epimerase activity IEP Enrichment
BP GO:0009085 lysine biosynthetic process IEP Enrichment
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Enrichment
MF GO:0015149 hexose transmembrane transporter activity IEP Enrichment
MF GO:0015153 rhamnose transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
BP GO:0015749 monosaccharide transmembrane transport IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Enrichment
BP GO:0046451 diaminopimelate metabolic process IEP Enrichment
MF GO:0047661 amino-acid racemase activity IEP Enrichment
MF GO:0051119 sugar transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR000847 Tscrpt_reg_HTH_LysR 4 63
IPR005119 LysR_subst-bd 90 291
No external refs found!