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  5. AGT22369

AGT22369 (N559_0571)


Aliases : N559_0571

Description : 50S ribosomal protein L21 [Ensembl].


Gene families : OG_02_0000351 (OrthoFinder) Phylogenetic Tree(s): OG0000351_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22369
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AAC76218 rplU, b3186 50S ribosomal subunit protein L21 [Ensembl]. Ribosomal... 0.11 OrthoFinder
AAL22173 STM3304, rplU 50S ribosomal subunit protein L21 [Ensembl]. Ribosomal... 0.08 OrthoFinder
AHY39367 rplU, CJ8421_00480 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.03 OrthoFinder
AKP14815 rplU, WX61_00743 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.02 OrthoFinder
CBI66823 rplU, HPB8_1266 large subunit ribosomal protein L21 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CCL17311 rplU, BN171_1430038 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.03 OrthoFinder
CCP45235 rplU, Rv2442c 50S ribosomal protein L21 RplU [Ensembl]. Ribosomal... 0.03 OrthoFinder
CRN65825 rplU 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.1 OrthoFinder
EDJ91660 CGSHi22421_07893 50S ribosomal protein L21 [Ensembl]. Ribosomal... 0.03 OrthoFinder
KNA50264 VCV51_033695 ribosomal protein L21 [Ensembl]. Ribosomal prokaryotic... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0004427 inorganic diphosphatase activity IEP Enrichment
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Enrichment
MF GO:0004803 transposase activity IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
BP GO:0006313 transposition, DNA-mediated IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009059 macromolecule biosynthetic process IEP Enrichment
MF GO:0015097 mercury ion transmembrane transporter activity IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
BP GO:0015694 mercury ion transport IEP Enrichment
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
BP GO:0032196 transposition IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901566 organonitrogen compound biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR028909 L21p-like 1 101
No external refs found!