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  5. AGT22370

AGT22370 (N559_0572)


Aliases : N559_0572

Description : 50S ribosomal protein L27 [Ensembl].


Gene families : OG_02_0000421 (OrthoFinder) Phylogenetic Tree(s): OG0000421_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22370
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AAC76217 rpmA, b3185 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.21 OrthoFinder
AAL22172 STM3303, rpmA 50S ribosomal subunit protein L27 [Ensembl]. Ribosomal... 0.11 OrthoFinder
ADK87189 rpmA, MPNE_0380 ribosomal protein L27 [Ensembl]. Ribosomal L27 protein... 0.02 OrthoFinder
AEA93392 rpmA, OG1RF_10705 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.07 OrthoFinder
AHY39368 rpmA, CJ8421_00485 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.04 OrthoFinder
AKP14816 rpmA, WX61_00744 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.05 OrthoFinder
CBI66822 rpmA, HPB8_1265 large subunit ribosomal protein L27 [Ensembl]. Ribosomal... 0.05 OrthoFinder
CCG26585 No alias LSU ribosomal protein L27p [Ensembl]. Ribosomal L27... 0.04 OrthoFinder
CCL17313 rpmA, BN171_1430040 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.05 OrthoFinder
CCP45234 rpmA, Rv2441c 50S ribosomal protein L27 RpmA [Ensembl]. Ribosomal L27... 0.06 OrthoFinder
CPC84847 rpmA, ERS093114_01475 50S ribosomal protein L25 [Ensembl]. Ribosomal L27... 0.07 OrthoFinder
CRN65841 rpmA 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.06 OrthoFinder
EDJ91659 rpmA, CGSHi22421_07888 50S ribosomal protein L27 [Ensembl]. Ribosomal L27... 0.04 OrthoFinder
KNA50265 VCV51_033696 ribosomal L27 protein [Ensembl]. Ribosomal L27 protein... 0.12 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008320 protein transmembrane transporter activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
MF GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0022884 macromolecule transmembrane transporter activity IEP Enrichment
MF GO:0140318 protein transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR001684 Ribosomal_L27 2 82
No external refs found!