AGT22412 (N559_0615)

Aliases : N559_0615

Description : putative DEOR-type transcriptional regulator [Ensembl]. DeoR C terminal sensor domain, DeoR-like helix-turn-helix domain, DeoR-type HTH domain [InterProScan].

Gene families : OG_02_0000026 (OrthoFinder) Phylogenetic Tree(s): OG0000026_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AGT22412
Cluster	HCCA: Cluster_30

Target	Alias	Description	ECC score	Gene Family Method
AAL21857	STM2979, fucR	positive regulator of the fuc operon [Ensembl]. DeoR C...	0.04	OrthoFinder
AAL23201	STM4381, yjfQ	putative transcriptional repressor [Ensembl]. DeoR C...	0.03	OrthoFinder
AEA94247	lacR2, OG1RF_11560	lactose PTS family porter repressor LacR [Ensembl]. DeoR...	0.03	OrthoFinder
AKI50105	glcR, L2625_02263	transcriptional regulator of sugar metabolism, DeoR...	0.05	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006259	DNA metabolic process	IEP	Enrichment
BP	GO:0006304	DNA modification	IEP	Enrichment
BP	GO:0006305	DNA alkylation	IEP	Enrichment
BP	GO:0006306	DNA methylation	IEP	Enrichment
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Enrichment
MF	GO:0009007	site-specific DNA-methyltransferase (adenine-specific) activity	IEP	Enrichment
MF	GO:0009008	DNA-methyltransferase activity	IEP	Enrichment
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Enrichment
BP	GO:0032259	methylation	IEP	Enrichment
BP	GO:0032775	DNA methylation on adenine	IEP	Enrichment
BP	GO:0043414	macromolecule methylation	IEP	Enrichment
BP	GO:0044728	DNA methylation or demethylation	IEP	Enrichment
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR014036	DeoR_C	82	236
IPR001034	DeoR_HTH	6	58

External Links

No external refs found!

AGT22412 (N559_0615)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation