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  5. AGT22570

AGT22570 (N559_0779)


Aliases : N559_0779

Description : integrating conjugative element, PFGI_1 class, ParB family protein [Ensembl]. DNA binding domain [InterProScan].


Gene families : OG_02_0002484 (OrthoFinder) Phylogenetic Tree(s): OG0002484_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22570
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
CRN75644 No alias integrating conjugative element, PFGI_1 class, ParB... 0.09 OrthoFinder
CRN94453 No alias integrating conjugative element, PFGI_1 class, ParB... 0.11 OrthoFinder
CRP13717 No alias integrating conjugative element, PFGI_1 class, ParB... 0.1 OrthoFinder
EDJ90781 CGSHi22421_00415 hypothetical protein [Ensembl]. ParB-like nuclease... 0.07 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
BP GO:0006525 arginine metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
CC GO:0009289 pilus IEP Enrichment
BP GO:0016032 viral process IEP Enrichment
BP GO:0019069 viral capsid assembly IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
CC GO:0042995 cell projection IEP Enrichment
InterPro domains Description Start Stop
IPR020900 Arg_repress_DNA-bd 131 155
No external refs found!