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  5. AGT22638

AGT22638 (N559_0849)


Aliases : N559_0849

Description : twitching motility protein [Ensembl].


Gene families : OG_02_0000073 (OrthoFinder) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22638
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
AAL19107 STM0143, hofB putative integral membrane protein [Ensembl]. Type II... 0.07 OrthoFinder
AAL21974 STM3099, yggR putative protein transport [Ensembl]. Type II/IV... 0.07 OrthoFinder
CRN95468 epsE_2 Type II traffic warden ATPase [Ensembl]. Type II/IV... 0.03 OrthoFinder
CRN98354 xpsE_1 Type II traffic warden ATPase [Ensembl]. Type II... 0.05 OrthoFinder
CRO89151 pilT_2 Twitching mobility protein [Ensembl]. Type II/IV... 0.02 OrthoFinder
CRO89185 pilT_3 Twitching mobility protein [Ensembl]. Type II/IV... 0.02 OrthoFinder
EDJ90499 CGSHi22421_06362 protein transport protein [Ensembl]. Type II secretion... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008198 ferrous iron binding IEP Enrichment
MF GO:0008733 L-arabinose isomerase activity IEP Enrichment
MF GO:0008740 L-rhamnose isomerase activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0015716 organic phosphonate transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019299 rhamnose metabolic process IEP Enrichment
BP GO:0019634 organic phosphonate metabolic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019700 organic phosphonate catabolic process IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071702 organic substance transport IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
InterPro domains Description Start Stop
IPR001482 T2SS/T4SS 12 257
No external refs found!