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AGT22650 (N559_0861)


Aliases : N559_0861

Description : arginine decarboxylase [Ensembl]. pyridoxal binding domain, Arginine decarboxylase helical bundle domain [InterProScan].


Gene families : OG_02_0001481 (OrthoFinder) Phylogenetic Tree(s): OG0001481_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22650
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AAC75975 speA, b2938 biosynthetic arginine decarboxylase, PLP-binding... 0.04 OrthoFinder
AAL21961 STM3086, speA arginine decarboxylase [Ensembl]. Pyridoxal-dependent... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003941 L-serine ammonia-lyase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0008104 protein localization IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
CC GO:0009279 cell outer membrane IEP Enrichment
BP GO:0015031 protein transport IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016840 carbon-nitrogen lyase activity IEP Enrichment
MF GO:0016841 ammonia-lyase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
BP GO:0033036 macromolecule localization IEP Enrichment
BP GO:0045184 establishment of protein localization IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
InterPro domains Description Start Stop
IPR022644 De-COase2_N 79 346
IPR040634 Arg_decarb_HB 371 457
IPR041128 Arg_decarbox_C 585 634
No external refs found!