AGT22943 (N559_1176)


Aliases : N559_1176

Description : hydrogenase 3 membrane subunit [Ensembl].


Gene families : OG_02_0002354 (OrthoFinder) Phylogenetic Tree(s): OG0002354_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AGT22943
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
AAC75536 hyfC, b2483 hydrogenase 4, membrane subunit [Ensembl]. NADH... 0.04 OrthoFinder
AAC75764 hycD, b2722 hydrogenase 3, membrane subunit [Ensembl]. NADH... 0.17 OrthoFinder
AAL21730 STM2850, hycD hydrogenase 3, membrane subunit [Ensembl]. NADH... 0.15 OrthoFinder
CCP42809 hycD, Rv0084 Possible formate hydrogenlyase HycD (FHL) [Ensembl].... 0.04 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0015099 nickel cation transmembrane transporter activity IEP Enrichment
BP GO:0015675 nickel cation transport IEP Enrichment
MF GO:0016151 nickel cation binding IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0035444 nickel cation transmembrane transport IEP Enrichment
BP GO:0042180 cellular ketone metabolic process IEP Enrichment
BP GO:0042181 ketone biosynthetic process IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
MF GO:0043546 molybdopterin cofactor binding IEP Enrichment
BP GO:0045149 acetoin metabolic process IEP Enrichment
BP GO:0045151 acetoin biosynthetic process IEP Enrichment
BP GO:0046165 alcohol biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0047605 acetolactate decarboxylase activity IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Enrichment
BP GO:1902652 secondary alcohol metabolic process IEP Enrichment
BP GO:1902653 secondary alcohol biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001694 NADH_UbQ_OxRdtase_su1/FPO 7 301
No external refs found!